Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579330.1 |
| length | 174 |
| RNA type | ncRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC117598755 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 13395466 ~ 13399225 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249469 | lncRNA | downstream | 56 | 13390616 ~ 13395410 (-) | False | elof1 |
| XR_003402958.2 | lncRNA | downstream | 22528 | 13369454 ~ 13372938 (-) | True | LOC113528601 |
| TU249463 | lncRNA | downstream | 40881 | 13310533 ~ 13354585 (-) | True | G210570 |
| TU249332 | lncRNA | downstream | 223400 | 13171841 ~ 13172066 (-) | True | G210461 |
| TU249304 | lncRNA | downstream | 299729 | 13095520 ~ 13095737 (-) | True | G210436 |
| TU249504 | lncRNA | upstream | 5914 | 13405139 ~ 13405357 (-) | True | G210607 |
| TU249543 | lncRNA | upstream | 46511 | 13445736 ~ 13446438 (-) | True | G210640 |
| XR_003402926.2 | lncRNA | upstream | 64314 | 13463539 ~ 13475462 (-) | True | LOC113528343 |
| TU249602 | lncRNA | upstream | 126156 | 13525381 ~ 13525580 (-) | True | G210690 |
| TU249799 | lncRNA | upstream | 192214 | 13591439 ~ 13637837 (-) | False | G210858 |
| XM_026916221.2 | mRNA | downstream | 9 | 13390616 ~ 13395457 (-) | True | elof1 |
| XM_026917193.2 | mRNA | downstream | 127292 | 13241850 ~ 13268174 (-) | True | LOC113528569 |
| XM_026917090.2 | mRNA | downstream | 168591 | 13223244 ~ 13226875 (-) | True | nfil3-6 |
| XM_026916922.2 | mRNA | downstream | 175444 | 13210369 ~ 13220022 (-) | False | nfil3-2 |
| XM_026916923.2 | mRNA | downstream | 176393 | 13210369 ~ 13219073 (-) | True | nfil3-2 |
| XM_026917009.2 | mRNA | upstream | 33002 | 13432227 ~ 13435356 (-) | True | swsap1 |
| XM_026916843.2 | mRNA | upstream | 95761 | 13494986 ~ 13498163 (-) | True | gadd45gip1 |
| XM_026916077.2 | mRNA | upstream | 262938 | 13662163 ~ 13669491 (-) | True | nme4 |
| XM_026916672.2 | mRNA | upstream | 271684 | 13670909 ~ 13695259 (-) | True | xpo6 |
| XM_034309975.1 | mRNA | upstream | 297388 | 13696613 ~ 13702527 (-) | False | antkmt |
| trnas-aga_12 | other | downstream | 568927 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579428.1 | other | downstream | 836253 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579425.1 | other | downstream | 836253 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579426.1 | other | downstream | 836253 | 12548830 ~ 12559213 (-) | False | tom1 |
| XR_004579427.1 | other | downstream | 836253 | 12549120 ~ 12559213 (-) | False | tom1 |
| XR_003402937.2 | other | upstream | 604944 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 621023 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 1088596 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 1121052 | 14520277 ~ 14520975 (-) | True | G211151 |
| XR_004579411.1 | other | upstream | 1279525 | 14678750 ~ 14690132 (-) | False | LOC113528445 |
