Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579372.1 |
| length | 859 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC117598834 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12947310 ~ 12949117 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU249177 | lncRNA | downstream | 18502 | 12926645 ~ 12928808 (-) | True | G210348 |
| TU249180 | lncRNA | downstream | 23846 | 12921937 ~ 12923464 (-) | True | G210350 |
| TU249178 | lncRNA | downstream | 77124 | 12869252 ~ 12870186 (-) | True | G210349 |
| TU249181 | lncRNA | downstream | 78830 | 12867590 ~ 12868480 (-) | True | G210351 |
| TU248929 | lncRNA | downstream | 360221 | 12586431 ~ 12587089 (-) | True | G210123 |
| XR_003402901.2 | lncRNA | upstream | 30848 | 12979965 ~ 13020678 (-) | True | LOC113527982 |
| TU249259 | lncRNA | upstream | 30853 | 12979970 ~ 12990033 (-) | False | LOC113527982 |
| TU249260 | lncRNA | upstream | 30853 | 12979970 ~ 12990121 (-) | False | LOC113527982 |
| TU249275 | lncRNA | upstream | 85011 | 13034128 ~ 13034852 (-) | True | G210412 |
| TU249295 | lncRNA | upstream | 128882 | 13077999 ~ 13078945 (-) | True | G210427 |
| XM_034309783.1 | mRNA | downstream | 334384 | 12593577 ~ 12612926 (-) | False | pik3r6b |
| XM_034309784.1 | mRNA | downstream | 337556 | 12593577 ~ 12609754 (-) | False | pik3r6b |
| XM_026916230.2 | mRNA | downstream | 337556 | 12593577 ~ 12609754 (-) | False | pik3r6b |
| XM_026916229.2 | mRNA | downstream | 337557 | 12593577 ~ 12609753 (-) | True | pik3r6b |
| XM_034309785.1 | mRNA | downstream | 341262 | 12593577 ~ 12606048 (-) | False | pik3r6b |
| XM_034309972.1 | mRNA | upstream | 98202 | 13047319 ~ 13063983 (-) | False | ilf3b |
| XM_026916474.2 | mRNA | upstream | 98202 | 13047319 ~ 13062742 (-) | True | ilf3b |
| XM_034309973.1 | mRNA | upstream | 100453 | 13049570 ~ 13062742 (-) | False | ilf3b |
| XM_026916475.2 | mRNA | upstream | 101116 | 13050233 ~ 13062742 (-) | False | ilf3b |
| XM_026917297.2 | mRNA | upstream | 147142 | 13096259 ~ 13104829 (-) | True | gcdhb |
| trnas-aga_12 | other | downstream | 120771 | 12826458 ~ 12826539 (-) | True | trnas-aga_12 |
| XR_004579428.1 | other | downstream | 388097 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579330.1 | other | upstream | 446349 | 13395466 ~ 13399225 (-) | True | LOC117598755 |
| XR_003402937.2 | other | upstream | 1055052 | 14004169 ~ 14006512 (-) | False | LOC113528401 |
| XR_003402952.2 | other | upstream | 1071131 | 14020248 ~ 14029641 (-) | False | pecam1 |
| XR_004579449.1 | other | upstream | 1538704 | 14487821 ~ 14490775 (-) | True | LOC117599009 |
| TU250141 | other | upstream | 1571160 | 14520277 ~ 14520975 (-) | True | G211151 |
