Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579410.1 |
| length | 143 |
| RNA type | ncRNA |
| GC content | 0.57 |
| exon number | 3 |
| gene id | LOC117598975 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22321174 ~ 22321733 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254808 | lncRNA | downstream | 37844 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | downstream | 37844 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU254864 | lncRNA | downstream | 80212 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU254889 | lncRNA | downstream | 83663 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254995 | lncRNA | downstream | 123762 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU255019 | lncRNA | upstream | 17309 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 68623 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 124389 | 22446122 ~ 22543980 (-) | True | G215262 |
| TU255051 | lncRNA | upstream | 153288 | 22475021 ~ 22507863 (-) | True | G215269 |
| XR_004579407.1 | lncRNA | upstream | 156243 | 22477976 ~ 22480922 (-) | True | LOC117598972 |
| XM_026936343.2 | mRNA | downstream | 707299 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 707299 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 940958 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 954062 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 4993 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 77952 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 230991 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 231896 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 231897 | 22553630 ~ 22582102 (-) | False | topaz1 |
| LOC117598862 | other | downstream | 899 | 22319544 ~ 22320275 (-) | True | LOC117598862 |
| TU255010 | other | downstream | 7303 | 22312921 ~ 22313871 (-) | True | LOC113546926 |
| LOC113546926 | other | downstream | 7737 | 22312787 ~ 22313437 (-) | False | LOC113546926 |
| TU254855 | other | downstream | 43639 | 22277067 ~ 22277535 (-) | False | G215182 |
| LOC117598921 | other | downstream | 43705 | 22277026 ~ 22277469 (-) | True | LOC117598921 |
| TU255018 | other | upstream | 17309 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
| XR_004579404.1 | other | upstream | 87501 | 22409234 ~ 22419910 (-) | False | LOC117598969 |
| XR_004579403.1 | other | upstream | 91934 | 22413667 ~ 22419910 (-) | True | LOC117598969 |
| TU255282 | other | upstream | 376680 | 22698413 ~ 22704479 (-) | False | smim13 |
| TU255280 | other | upstream | 447904 | 22769637 ~ 22778819 (-) | False | cltb |
