Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU132527 |
| length | 543 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G112144 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 9553026 ~ 9553678 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU132524 | lncRNA | downstream | 1974 | 9550812 ~ 9551052 (-) | True | G112141 |
| XR_003404367.2 | lncRNA | downstream | 65957 | 9481256 ~ 9487069 (-) | True | LOC113542930 |
| TU132387 | lncRNA | downstream | 152447 | 9400354 ~ 9400579 (-) | True | G112026 |
| TU132286 | lncRNA | downstream | 210973 | 9340917 ~ 9342053 (-) | False | fgf16 |
| TU132284 | lncRNA | downstream | 214700 | 9337874 ~ 9338326 (-) | True | G111939 |
| TU132549 | lncRNA | upstream | 152259 | 9705937 ~ 9706232 (-) | True | G112161 |
| TU132856 | lncRNA | upstream | 405964 | 9959642 ~ 9963979 (-) | False | tmsb1 |
| TU132864 | lncRNA | upstream | 411029 | 9964707 ~ 9965338 (-) | True | G112454 |
| TU132863 | lncRNA | upstream | 412107 | 9965785 ~ 9967443 (-) | False | LOC113542827 |
| TU132869 | lncRNA | upstream | 416699 | 9970377 ~ 9970649 (-) | True | G112459 |
| XM_026940568.2 | mRNA | downstream | 128912 | 9410848 ~ 9424114 (-) | False | LOC113542799 |
| XM_026940567.2 | mRNA | downstream | 128914 | 9410848 ~ 9424112 (-) | True | LOC113542799 |
| XM_026940383.2 | mRNA | downstream | 205092 | 9340373 ~ 9347934 (-) | True | fgf16 |
| XM_026940340.2 | mRNA | downstream | 351891 | 9121034 ~ 9201135 (-) | False | thoc2 |
| XM_034305630.1 | mRNA | upstream | 16436 | 9570114 ~ 9575347 (-) | False | irg1l |
| XM_026940357.2 | mRNA | upstream | 16436 | 9570114 ~ 9575347 (-) | True | irg1l |
| XM_026940386.2 | mRNA | upstream | 33657 | 9587335 ~ 9593325 (-) | True | si:ch211-153b23.4 |
| XM_026940633.2 | mRNA | upstream | 45109 | 9598787 ~ 9601926 (-) | True | zgc:174917 |
| XM_026940632.2 | mRNA | upstream | 45109 | 9598787 ~ 9601923 (-) | False | zgc:174917 |
| XR_003404370.1 | other | downstream | 1070963 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| TU130424 | other | downstream | 3724468 | 5826230 ~ 5828558 (-) | True | G110290 |
| TU130314 | other | downstream | 3755090 | 5793847 ~ 5797936 (-) | True | G110204 |
| TU130235 | other | downstream | 3864187 | 5687579 ~ 5688839 (-) | False | zgc:113229 |
| TU129845 | other | downstream | 4335007 | 5204762 ~ 5218019 (-) | True | G109827 |
| XR_003404336.2 | other | upstream | 34150 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404347.2 | other | upstream | 1706431 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| TU133937 | other | upstream | 1805460 | 11359138 ~ 11359579 (-) | True | G113398 |
| TU134062 | other | upstream | 2058295 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU134224 | other | upstream | 2265200 | 11818878 ~ 11858016 (-) | True | G113674 |
