Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU132549 |
| length | 296 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G112161 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 9705937 ~ 9706232 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU132527 | lncRNA | downstream | 152259 | 9553026 ~ 9553678 (-) | True | G112144 |
| TU132524 | lncRNA | downstream | 154885 | 9550812 ~ 9551052 (-) | True | G112141 |
| XR_003404367.2 | lncRNA | downstream | 218868 | 9481256 ~ 9487069 (-) | True | LOC113542930 |
| TU132387 | lncRNA | downstream | 305358 | 9400354 ~ 9400579 (-) | True | G112026 |
| TU132286 | lncRNA | downstream | 363884 | 9340917 ~ 9342053 (-) | False | fgf16 |
| TU132856 | lncRNA | upstream | 253410 | 9959642 ~ 9963979 (-) | False | tmsb1 |
| TU132864 | lncRNA | upstream | 258475 | 9964707 ~ 9965338 (-) | True | G112454 |
| TU132863 | lncRNA | upstream | 259553 | 9965785 ~ 9967443 (-) | False | LOC113542827 |
| TU132869 | lncRNA | upstream | 264145 | 9970377 ~ 9970649 (-) | True | G112459 |
| TU132886 | lncRNA | upstream | 296547 | 10002779 ~ 10002992 (-) | True | G112473 |
| XM_026940387.2 | mRNA | downstream | 90776 | 9604625 ~ 9615161 (-) | True | si:ch211-153b23.7 |
| XM_026940633.2 | mRNA | downstream | 104011 | 9598787 ~ 9601926 (-) | True | zgc:174917 |
| XM_026940632.2 | mRNA | downstream | 104014 | 9598787 ~ 9601923 (-) | False | zgc:174917 |
| XM_026940386.2 | mRNA | downstream | 112612 | 9587335 ~ 9593325 (-) | True | si:ch211-153b23.4 |
| XM_034305630.1 | mRNA | downstream | 130590 | 9570114 ~ 9575347 (-) | False | irg1l |
| XM_034305798.1 | mRNA | upstream | 199726 | 9905958 ~ 9917165 (-) | False | znf711 |
| XM_034305799.1 | mRNA | upstream | 199726 | 9905958 ~ 9917161 (-) | False | znf711 |
| XM_026940392.2 | mRNA | upstream | 199726 | 9905958 ~ 9916906 (-) | False | znf711 |
| XM_026940393.2 | mRNA | upstream | 199726 | 9905958 ~ 9916906 (-) | False | znf711 |
| XM_034305801.1 | mRNA | upstream | 199726 | 9905958 ~ 9916760 (-) | True | znf711 |
| XR_003404336.2 | other | downstream | 112612 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404370.1 | other | downstream | 1223874 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| TU130424 | other | downstream | 3877379 | 5826230 ~ 5828558 (-) | True | G110290 |
| TU130314 | other | downstream | 3908001 | 5793847 ~ 5797936 (-) | True | G110204 |
| TU130235 | other | downstream | 4017098 | 5687579 ~ 5688839 (-) | False | zgc:113229 |
| XR_003404347.2 | other | upstream | 1553877 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| TU133937 | other | upstream | 1652906 | 11359138 ~ 11359579 (-) | True | G113398 |
| TU134062 | other | upstream | 1905741 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU134224 | other | upstream | 2112646 | 11818878 ~ 11858016 (-) | True | G113674 |
| XR_004578392.1 | other | upstream | 2402612 | 12108844 ~ 12112201 (-) | True | LOC117597634 |
