Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU132886 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G112473 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 10002779 ~ 10002992 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU132869 | lncRNA | downstream | 32130 | 9970377 ~ 9970649 (-) | True | G112459 |
| TU132863 | lncRNA | downstream | 35336 | 9965785 ~ 9967443 (-) | False | LOC113542827 |
| TU132864 | lncRNA | downstream | 37441 | 9964707 ~ 9965338 (-) | True | G112454 |
| TU132856 | lncRNA | downstream | 38800 | 9959642 ~ 9963979 (-) | False | tmsb1 |
| TU132549 | lncRNA | downstream | 296547 | 9705937 ~ 9706232 (-) | True | G112161 |
| TU132995 | lncRNA | upstream | 220952 | 10223944 ~ 10224651 (-) | True | G112569 |
| XR_004578481.1 | lncRNA | upstream | 231827 | 10234819 ~ 10241509 (-) | True | LOC117597733 |
| TU133096 | lncRNA | upstream | 350713 | 10353705 ~ 10353904 (-) | True | G112651 |
| TU133142 | lncRNA | upstream | 442657 | 10445649 ~ 10445952 (-) | True | G112689 |
| TU133143 | lncRNA | upstream | 445407 | 10448399 ~ 10448613 (-) | True | G112690 |
| XM_026940551.2 | mRNA | downstream | 10047 | 9981134 ~ 9992732 (-) | True | prps1b |
| XM_034305669.1 | mRNA | downstream | 28984 | 9966780 ~ 9973795 (-) | False | LOC113542827 |
| XM_026940612.2 | mRNA | downstream | 28986 | 9966780 ~ 9973793 (-) | False | LOC113542827 |
| XM_034305668.1 | mRNA | downstream | 30773 | 9966780 ~ 9972006 (-) | True | LOC113542827 |
| XM_026940603.2 | mRNA | downstream | 38779 | 9959576 ~ 9964000 (-) | True | tmsb1 |
| XM_026940606.2 | mRNA | upstream | 69179 | 10072171 ~ 10075615 (-) | True | rhogd |
| XM_026940644.2 | mRNA | upstream | 90804 | 10093796 ~ 10105232 (-) | True | sybl1 |
| XM_026940573.2 | mRNA | upstream | 117284 | 10120276 ~ 10130316 (-) | True | LOC113542803 |
| XM_026940637.2 | mRNA | upstream | 155700 | 10158692 ~ 10171970 (-) | True | rraga |
| XM_026940479.2 | mRNA | upstream | 172656 | 10175648 ~ 10223540 (-) | False | LOC113542752 |
| XR_003404336.2 | other | downstream | 409454 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404370.1 | other | downstream | 1520716 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| TU130424 | other | downstream | 4174221 | 5826230 ~ 5828558 (-) | True | G110290 |
| TU130314 | other | downstream | 4204843 | 5793847 ~ 5797936 (-) | True | G110204 |
| TU130235 | other | downstream | 4313940 | 5687579 ~ 5688839 (-) | False | zgc:113229 |
| XR_003404347.2 | other | upstream | 1257117 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| TU133937 | other | upstream | 1356146 | 11359138 ~ 11359579 (-) | True | G113398 |
| TU134062 | other | upstream | 1608981 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU134224 | other | upstream | 1815886 | 11818878 ~ 11858016 (-) | True | G113674 |
| XR_004578392.1 | other | upstream | 2105852 | 12108844 ~ 12112201 (-) | True | LOC117597634 |
