Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU133700 |
| length | 279 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G113195 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 10943052 ~ 11019852 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133462 | lncRNA | downstream | 81109 | 10861726 ~ 10861943 (-) | True | G112968 |
| TU133461 | lncRNA | downstream | 83056 | 10859780 ~ 10859996 (-) | True | G112967 |
| TU133458 | lncRNA | downstream | 83636 | 10857640 ~ 10859416 (-) | True | G112964 |
| TU133457 | lncRNA | downstream | 85510 | 10856983 ~ 10857542 (-) | True | G112963 |
| TU133447 | lncRNA | downstream | 86205 | 10854899 ~ 10856847 (-) | True | G112962 |
| TU133753 | lncRNA | upstream | 34930 | 11054782 ~ 11055121 (-) | True | G113248 |
| TU133782 | lncRNA | upstream | 74244 | 11094096 ~ 11094302 (-) | True | G113277 |
| TU133672 | lncRNA | upstream | 111950 | 11131802 ~ 11141283 (-) | True | G113167 |
| TU133669 | lncRNA | upstream | 122821 | 11142673 ~ 11143848 (-) | False | G113167 |
| TU133903 | lncRNA | upstream | 202598 | 11222450 ~ 11222672 (-) | True | G113369 |
| XM_026940556.2 | mRNA | downstream | 241089 | 10666316 ~ 10701963 (-) | True | hdx |
| XM_026940558.2 | mRNA | downstream | 260120 | 10666316 ~ 10682932 (-) | False | hdx |
| XM_034306030.1 | mRNA | downstream | 260121 | 10666316 ~ 10682931 (-) | False | hdx |
| XM_026940554.2 | mRNA | downstream | 260122 | 10666316 ~ 10682930 (-) | False | hdx |
| XM_034306031.1 | mRNA | downstream | 264968 | 10666316 ~ 10678084 (-) | False | hdx |
| XM_026940426.1 | mRNA | upstream | 71845 | 11091697 ~ 11099390 (-) | True | LOC113542731 |
| XM_026940469.2 | mRNA | upstream | 238599 | 11258451 ~ 11325468 (-) | False | LOC113542749 |
| XM_026940466.2 | mRNA | upstream | 238599 | 11258451 ~ 11325468 (-) | False | LOC113542749 |
| XM_026940463.2 | mRNA | upstream | 238599 | 11258451 ~ 11325468 (-) | False | LOC113542749 |
| XM_026940464.2 | mRNA | upstream | 238599 | 11258451 ~ 11325468 (-) | False | LOC113542749 |
| XR_003404336.2 | other | downstream | 1349727 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404370.1 | other | downstream | 2460989 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| TU130424 | other | downstream | 5114494 | 5826230 ~ 5828558 (-) | True | G110290 |
| TU130314 | other | downstream | 5145116 | 5793847 ~ 5797936 (-) | True | G110204 |
| TU130235 | other | downstream | 5254213 | 5687579 ~ 5688839 (-) | False | zgc:113229 |
| XR_003404347.2 | other | upstream | 240257 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| TU133937 | other | upstream | 339286 | 11359138 ~ 11359579 (-) | True | G113398 |
| TU134062 | other | upstream | 592121 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU134224 | other | upstream | 799026 | 11818878 ~ 11858016 (-) | True | G113674 |
| XR_004578392.1 | other | upstream | 1088992 | 12108844 ~ 12112201 (-) | True | LOC117597634 |
