Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134142 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G113596 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 11742661 ~ 11742874 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134140 | lncRNA | downstream | 1014 | 11741446 ~ 11741647 (-) | True | G113594 |
| TU134131 | lncRNA | downstream | 15269 | 11727061 ~ 11727392 (-) | True | G113585 |
| TU134105 | lncRNA | downstream | 30656 | 11711769 ~ 11712005 (-) | True | G113559 |
| TU134063 | lncRNA | downstream | 131690 | 11610436 ~ 11610971 (-) | True | G113517 |
| TU133999 | lncRNA | downstream | 267591 | 11474175 ~ 11475070 (-) | True | G113456 |
| TU134150 | lncRNA | upstream | 14782 | 11757656 ~ 11757881 (-) | True | G113604 |
| TU134182 | lncRNA | upstream | 70683 | 11813557 ~ 11813791 (-) | True | G113636 |
| TU134240 | lncRNA | upstream | 149647 | 11892521 ~ 11892728 (-) | True | G113690 |
| TU134241 | lncRNA | upstream | 154251 | 11897125 ~ 11897363 (-) | True | G113691 |
| TU134264 | lncRNA | upstream | 217265 | 11960139 ~ 11962742 (-) | True | G113712 |
| XM_026940470.2 | mRNA | downstream | 198937 | 11481891 ~ 11543724 (-) | False | LOC113542750 |
| XM_026940471.2 | mRNA | downstream | 199555 | 11481891 ~ 11543106 (-) | False | LOC113542750 |
| XM_026940472.2 | mRNA | downstream | 211687 | 11481891 ~ 11530974 (-) | True | LOC113542750 |
| XM_026940584.2 | mRNA | downstream | 343765 | 11388502 ~ 11398896 (-) | True | LOC113542810 |
| XM_026940396.2 | mRNA | downstream | 371468 | 11368194 ~ 11371193 (-) | True | asb12b |
| XM_026940548.2 | mRNA | upstream | 282907 | 12025781 ~ 12063137 (-) | True | hdac3 |
| XM_034306017.1 | mRNA | upstream | 282907 | 12025781 ~ 12063090 (-) | False | hdac3 |
| XM_034305660.1 | mRNA | upstream | 336650 | 12079524 ~ 12112216 (-) | False | LOC117597634 |
| XM_034305661.1 | mRNA | upstream | 365969 | 12108843 ~ 12112208 (-) | False | LOC117597634 |
| XM_026940665.2 | mRNA | upstream | 426834 | 12169708 ~ 12174905 (-) | False | LOC113542864 |
| TU134062 | other | downstream | 130092 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU133937 | other | downstream | 383082 | 11359138 ~ 11359579 (-) | True | G113398 |
| XR_003404347.2 | other | downstream | 417193 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| XR_003404336.2 | other | downstream | 2149336 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404370.1 | other | downstream | 3260598 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| TU134224 | other | upstream | 76004 | 11818878 ~ 11858016 (-) | True | G113674 |
| XR_004578392.1 | other | upstream | 365970 | 12108844 ~ 12112201 (-) | True | LOC117597634 |
| TU134531 | other | upstream | 578457 | 12321331 ~ 12350528 (-) | False | G113959 |
| TU134534 | other | upstream | 589882 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU134600 | other | upstream | 680854 | 12423728 ~ 12424057 (-) | True | G114013 |
