Item | Value |
---|---|
RNA id | TU134584 |
length | 217 |
lncRNA type | inter_gene |
GC content | 0.29 |
exon number | 1 |
gene id | G114001 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047601.1 |
NCBI id | CM018547.1 |
chromosome length | 30450434 |
location | 12379277 ~ 12379493 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU134537 | lncRNA | downstream | 1497 | 12377313 ~ 12377780 (-) | True | G113961 |
TU134530 | lncRNA | downstream | 10334 | 12321331 ~ 12368943 (-) | False | G113959 |
TU134532 | lncRNA | downstream | 10334 | 12362799 ~ 12368943 (-) | False | G113959 |
TU134535 | lncRNA | downstream | 17005 | 12350680 ~ 12362272 (-) | True | G113959 |
TU134567 | lncRNA | downstream | 86813 | 12291992 ~ 12292464 (-) | True | G113985 |
XR_004578438.1 | lncRNA | upstream | 121687 | 12501180 ~ 12503970 (-) | True | LOC117597691 |
TU134688 | lncRNA | upstream | 130377 | 12509870 ~ 12512353 (-) | True | G114095 |
TU134689 | lncRNA | upstream | 133336 | 12512829 ~ 12514622 (-) | True | G114096 |
TU134699 | lncRNA | upstream | 139162 | 12518655 ~ 12522672 (-) | True | G114103 |
TU134774 | lncRNA | upstream | 185255 | 12564748 ~ 12564968 (-) | True | G114169 |
XM_034306173.1 | mRNA | downstream | 69114 | 12298166 ~ 12310163 (-) | True | LOC117597734 |
XM_034306174.1 | mRNA | downstream | 69118 | 12298166 ~ 12310159 (-) | False | LOC117597734 |
XM_026940665.2 | mRNA | downstream | 204372 | 12169708 ~ 12174905 (-) | False | LOC113542864 |
XM_026940666.2 | mRNA | downstream | 204380 | 12169708 ~ 12174897 (-) | False | LOC113542864 |
XM_034305660.1 | mRNA | downstream | 267061 | 12079524 ~ 12112216 (-) | False | LOC117597634 |
XM_034305794.1 | mRNA | upstream | 58346 | 12437839 ~ 12492799 (-) | False | btk |
XM_026940674.2 | mRNA | upstream | 58346 | 12437839 ~ 12492799 (-) | False | btk |
XM_026940667.2 | mRNA | upstream | 58346 | 12437839 ~ 12492799 (-) | False | btk |
XM_026940668.2 | mRNA | upstream | 58346 | 12437839 ~ 12492799 (-) | False | btk |
XM_034305792.1 | mRNA | upstream | 58346 | 12437839 ~ 12492799 (-) | True | btk |
TU134534 | other | downstream | 17005 | 12332756 ~ 12362272 (-) | False | G113959 |
TU134531 | other | downstream | 28749 | 12321331 ~ 12350528 (-) | False | G113959 |
XR_004578392.1 | other | downstream | 267076 | 12108844 ~ 12112201 (-) | True | LOC117597634 |
TU134224 | other | downstream | 521261 | 11818878 ~ 11858016 (-) | True | G113674 |
TU134062 | other | downstream | 766708 | 11611973 ~ 11612569 (-) | True | G113516 |
TU134600 | other | upstream | 44235 | 12423728 ~ 12424057 (-) | True | G114013 |
TU134687 | other | upstream | 121478 | 12500971 ~ 12504801 (-) | False | timm8a |
TU134690 | other | upstream | 136865 | 12516358 ~ 12518194 (-) | True | G114097 |
TU134829 | other | upstream | 315278 | 12694771 ~ 12695509 (-) | True | G114215 |
TU135100 | other | upstream | 1168019 | 13547512 ~ 13550775 (-) | True | G114460 |