Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134774 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G114169 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 12564748 ~ 12564968 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134699 | lncRNA | downstream | 42076 | 12518655 ~ 12522672 (-) | True | G114103 |
| TU134689 | lncRNA | downstream | 50126 | 12512829 ~ 12514622 (-) | True | G114096 |
| TU134688 | lncRNA | downstream | 52395 | 12509870 ~ 12512353 (-) | True | G114095 |
| XR_004578438.1 | lncRNA | downstream | 60778 | 12501180 ~ 12503970 (-) | True | LOC117597691 |
| TU134584 | lncRNA | downstream | 185255 | 12379277 ~ 12379493 (-) | True | G114001 |
| TU134781 | lncRNA | upstream | 7379 | 12572347 ~ 12589625 (-) | True | G114176 |
| TU134788 | lncRNA | upstream | 99786 | 12664754 ~ 12665071 (-) | True | G114183 |
| XR_004578426.1 | lncRNA | upstream | 112000 | 12676968 ~ 12689365 (-) | False | LOC117597685 |
| XR_004578431.1 | lncRNA | upstream | 112877 | 12677845 ~ 12689354 (-) | True | LOC117597685 |
| TU134826 | lncRNA | upstream | 113184 | 12678152 ~ 12691407 (-) | False | LOC117597685 |
| XM_034305621.1 | mRNA | downstream | 15455 | 12535685 ~ 12549293 (-) | False | atoh8 |
| XM_026940795.2 | mRNA | downstream | 15466 | 12527491 ~ 12549282 (-) | False | atoh8 |
| XM_026940794.2 | mRNA | downstream | 15467 | 12532638 ~ 12549281 (-) | True | atoh8 |
| XM_026940609.2 | mRNA | downstream | 59938 | 12500940 ~ 12504810 (-) | True | timm8a |
| XM_034305792.1 | mRNA | downstream | 71949 | 12437839 ~ 12492799 (-) | True | btk |
| XM_026940457.2 | mRNA | upstream | 16488 | 12581456 ~ 12662949 (-) | False | spdl1 |
| XM_034305918.1 | mRNA | upstream | 16489 | 12581457 ~ 12662947 (-) | False | spdl1 |
| XM_026940454.2 | mRNA | upstream | 16489 | 12581457 ~ 12662946 (-) | False | spdl1 |
| XM_026940455.2 | mRNA | upstream | 16489 | 12581457 ~ 12662946 (-) | True | spdl1 |
| XM_026917900.2 | mRNA | upstream | 296682 | 12861650 ~ 12904853 (-) | True | hspa9 |
| TU134690 | other | downstream | 46554 | 12516358 ~ 12518194 (-) | True | G114097 |
| TU134687 | other | downstream | 59947 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134600 | other | downstream | 140691 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU134534 | other | downstream | 202476 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU134531 | other | downstream | 214220 | 12321331 ~ 12350528 (-) | False | G113959 |
| TU134829 | other | upstream | 129803 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU135100 | other | upstream | 982544 | 13547512 ~ 13550775 (-) | True | G114460 |
| trnae-uuc_1 | other | upstream | 1643948 | 14208916 ~ 14208987 (-) | True | trnae-uuc_1 |
| TU135547 | other | upstream | 1655348 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnav-uac | other | upstream | 1903585 | 14468553 ~ 14468625 (-) | True | trnav-uac |
