Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134830 |
| length | 229 |
| lncRNA type | inter_gene |
| GC content | 0.27 |
| exon number | 1 |
| gene id | G114216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 12695853 ~ 12696081 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134826 | lncRNA | downstream | 4446 | 12678152 ~ 12691407 (-) | False | LOC117597685 |
| XR_004578428.1 | lncRNA | downstream | 4668 | 12678866 ~ 12691185 (-) | False | LOC117597685 |
| XR_004578430.1 | lncRNA | downstream | 4668 | 12678866 ~ 12691185 (-) | False | LOC117597685 |
| XR_004578429.1 | lncRNA | downstream | 6222 | 12678866 ~ 12689631 (-) | False | LOC117597685 |
| XR_004578427.1 | lncRNA | downstream | 6223 | 12678866 ~ 12689630 (-) | False | LOC117597685 |
| TU134840 | lncRNA | upstream | 48391 | 12744472 ~ 12744681 (-) | True | G114226 |
| TU134841 | lncRNA | upstream | 48735 | 12744816 ~ 12745035 (-) | True | G114227 |
| TU134842 | lncRNA | upstream | 49054 | 12745135 ~ 12745387 (-) | True | G114228 |
| XR_003404333.2 | lncRNA | upstream | 49901 | 12745982 ~ 12755475 (-) | True | LOC113542678 |
| TU134902 | lncRNA | upstream | 215618 | 12911699 ~ 12911903 (-) | True | G114284 |
| XM_026940457.2 | mRNA | downstream | 32904 | 12581456 ~ 12662949 (-) | False | spdl1 |
| XM_034305918.1 | mRNA | downstream | 32906 | 12581457 ~ 12662947 (-) | False | spdl1 |
| XM_026940454.2 | mRNA | downstream | 32907 | 12581457 ~ 12662946 (-) | False | spdl1 |
| XM_026940455.2 | mRNA | downstream | 32907 | 12581457 ~ 12662946 (-) | True | spdl1 |
| XM_034305621.1 | mRNA | downstream | 146560 | 12535685 ~ 12549293 (-) | False | atoh8 |
| XM_026917900.2 | mRNA | upstream | 165569 | 12861650 ~ 12904853 (-) | True | hspa9 |
| XM_026917725.2 | mRNA | upstream | 238476 | 12934557 ~ 13027955 (-) | True | fbxo38 |
| XM_026917724.2 | mRNA | upstream | 238476 | 12934557 ~ 13010114 (-) | False | fbxo38 |
| XM_034305916.1 | mRNA | upstream | 238476 | 12934557 ~ 13010114 (-) | False | fbxo38 |
| XM_026917723.2 | mRNA | upstream | 238476 | 12934557 ~ 13010113 (-) | False | fbxo38 |
| TU134829 | other | downstream | 344 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU134690 | other | downstream | 177659 | 12516358 ~ 12518194 (-) | True | G114097 |
| TU134687 | other | downstream | 191052 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134600 | other | downstream | 271796 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU134534 | other | downstream | 333581 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU135100 | other | upstream | 851431 | 13547512 ~ 13550775 (-) | True | G114460 |
| trnae-uuc_1 | other | upstream | 1512835 | 14208916 ~ 14208987 (-) | True | trnae-uuc_1 |
| TU135547 | other | upstream | 1524235 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnav-uac | other | upstream | 1772472 | 14468553 ~ 14468625 (-) | True | trnav-uac |
| TU136727 | other | upstream | 3154940 | 15851021 ~ 15852220 (-) | True | G115842 |
