Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134914 |
| length | 493 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 4 |
| gene id | fbxo38 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 12934557 ~ 13027955 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134922 | lncRNA | downstream | 10070 | 13014572 ~ 13015871 (-) | True | G114302 |
| TU134919 | lncRNA | downstream | 13097 | 13012617 ~ 13012844 (-) | True | G114299 |
| TU134902 | lncRNA | downstream | 114038 | 12911699 ~ 12911903 (-) | True | G114284 |
| XR_003404333.2 | lncRNA | downstream | 270466 | 12745982 ~ 12755475 (-) | True | LOC113542678 |
| TU134842 | lncRNA | downstream | 280554 | 12745135 ~ 12745387 (-) | True | G114228 |
| TU134935 | lncRNA | upstream | 1935 | 13029858 ~ 13030120 (-) | True | G114314 |
| TU134934 | lncRNA | upstream | 29782 | 13057705 ~ 13058683 (-) | True | G114313 |
| TU135000 | lncRNA | upstream | 87826 | 13115749 ~ 13121619 (-) | True | G114375 |
| TU134989 | lncRNA | upstream | 96643 | 13124566 ~ 13129589 (-) | True | G114364 |
| TU135015 | lncRNA | upstream | 162063 | 13189986 ~ 13190226 (-) | True | G114390 |
| XM_026917728.2 | mRNA | downstream | 15825 | 12944152 ~ 13010116 (-) | False | fbxo38 |
| XM_026917724.2 | mRNA | downstream | 15827 | 12934557 ~ 13010114 (-) | False | fbxo38 |
| XM_034305916.1 | mRNA | downstream | 15827 | 12934557 ~ 13010114 (-) | False | fbxo38 |
| XM_026917723.2 | mRNA | downstream | 15828 | 12934557 ~ 13010113 (-) | False | fbxo38 |
| XM_026917900.2 | mRNA | downstream | 121088 | 12861650 ~ 12904853 (-) | True | hspa9 |
| XM_026918593.2 | mRNA | upstream | 34415 | 13062338 ~ 13063432 (-) | True | LOC113529411 |
| XM_026917663.2 | mRNA | upstream | 813696 | 13841619 ~ 13915588 (-) | False | pcdh19 |
| XM_026917661.2 | mRNA | upstream | 813696 | 13841619 ~ 13915588 (-) | True | pcdh19 |
| XM_034306105.1 | mRNA | upstream | 837117 | 13865040 ~ 13915588 (-) | False | pcdh19 |
| XM_034306106.1 | mRNA | upstream | 837128 | 13865051 ~ 13915588 (-) | False | pcdh19 |
| TU134829 | other | downstream | 330432 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU134690 | other | downstream | 507747 | 12516358 ~ 12518194 (-) | True | G114097 |
| TU134687 | other | downstream | 521140 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134600 | other | downstream | 601884 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU134534 | other | downstream | 663669 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU135100 | other | upstream | 519589 | 13547512 ~ 13550775 (-) | True | G114460 |
| trnae-uuc_1 | other | upstream | 1180993 | 14208916 ~ 14208987 (-) | True | trnae-uuc_1 |
| TU135547 | other | upstream | 1192393 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnav-uac | other | upstream | 1440630 | 14468553 ~ 14468625 (-) | True | trnav-uac |
| TU136727 | other | upstream | 2823098 | 15851021 ~ 15852220 (-) | True | G115842 |
