Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU135015 |
| length | 241 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G114390 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 13189986 ~ 13190226 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134989 | lncRNA | downstream | 60397 | 13124566 ~ 13129589 (-) | True | G114364 |
| TU135000 | lncRNA | downstream | 68367 | 13115749 ~ 13121619 (-) | True | G114375 |
| TU134934 | lncRNA | downstream | 131303 | 13057705 ~ 13058683 (-) | True | G114313 |
| TU134935 | lncRNA | downstream | 159866 | 13029858 ~ 13030120 (-) | True | G114314 |
| TU134913 | lncRNA | downstream | 162063 | 13024192 ~ 13027923 (-) | False | fbxo38 |
| TU135011 | lncRNA | upstream | 3429 | 13193655 ~ 13198200 (-) | True | G114386 |
| TU135091 | lncRNA | upstream | 316268 | 13506494 ~ 13506701 (-) | True | G114451 |
| TU135095 | lncRNA | upstream | 342762 | 13532988 ~ 13533294 (-) | True | G114455 |
| TU135098 | lncRNA | upstream | 347000 | 13537226 ~ 13537527 (-) | True | G114458 |
| TU135099 | lncRNA | upstream | 347320 | 13537546 ~ 13537774 (-) | True | G114459 |
| XM_026918593.2 | mRNA | downstream | 126554 | 13062338 ~ 13063432 (-) | True | LOC113529411 |
| XM_026917728.2 | mRNA | downstream | 179870 | 12944152 ~ 13010116 (-) | False | fbxo38 |
| XM_026917724.2 | mRNA | downstream | 179872 | 12934557 ~ 13010114 (-) | False | fbxo38 |
| XM_026917663.2 | mRNA | upstream | 651393 | 13841619 ~ 13915588 (-) | False | pcdh19 |
| XM_026917661.2 | mRNA | upstream | 651393 | 13841619 ~ 13915588 (-) | True | pcdh19 |
| XM_034306105.1 | mRNA | upstream | 674814 | 13865040 ~ 13915588 (-) | False | pcdh19 |
| XM_034306106.1 | mRNA | upstream | 674825 | 13865051 ~ 13915588 (-) | False | pcdh19 |
| XM_026917664.2 | mRNA | upstream | 681551 | 13871777 ~ 13915588 (-) | False | pcdh19 |
| TU134829 | other | downstream | 494477 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU134690 | other | downstream | 671792 | 12516358 ~ 12518194 (-) | True | G114097 |
| TU134687 | other | downstream | 685185 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134600 | other | downstream | 765929 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU134534 | other | downstream | 827714 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU135100 | other | upstream | 357286 | 13547512 ~ 13550775 (-) | True | G114460 |
| trnae-uuc_1 | other | upstream | 1018690 | 14208916 ~ 14208987 (-) | True | trnae-uuc_1 |
| TU135547 | other | upstream | 1030090 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnav-uac | other | upstream | 1278327 | 14468553 ~ 14468625 (-) | True | trnav-uac |
| TU136727 | other | upstream | 2660795 | 15851021 ~ 15852220 (-) | True | G115842 |
