Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026918306.2 |
| length | 757 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | pttg1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 15039603 ~ 15042499 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578406.1 | lncRNA | downstream | 23230 | 15007711 ~ 15016373 (-) | False | LOC113528719 |
| XR_004578405.1 | lncRNA | downstream | 23777 | 15007711 ~ 15015826 (-) | True | LOC113528719 |
| TU136099 | lncRNA | downstream | 235412 | 14803454 ~ 14804191 (-) | True | G115331 |
| TU136097 | lncRNA | downstream | 253585 | 14785329 ~ 14786018 (-) | True | G115329 |
| TU136072 | lncRNA | downstream | 266800 | 14755334 ~ 14772803 (-) | False | ebf1a |
| TU136210 | lncRNA | upstream | 38293 | 15080792 ~ 15082469 (-) | False | tmsb2 |
| TU136278 | lncRNA | upstream | 90698 | 15133197 ~ 15133435 (-) | True | G115477 |
| TU136359 | lncRNA | upstream | 276241 | 15318740 ~ 15318949 (-) | True | G115553 |
| TU136360 | lncRNA | upstream | 278521 | 15321020 ~ 15321301 (-) | True | G115554 |
| TU136440 | lncRNA | upstream | 358068 | 15400567 ~ 15402679 (-) | True | G115620 |
| XM_034306013.1 | mRNA | downstream | 107443 | 14917996 ~ 14932160 (-) | False | sh3tc2 |
| XM_034306011.1 | mRNA | downstream | 107443 | 14917996 ~ 14932160 (-) | False | sh3tc2 |
| XM_034306012.1 | mRNA | downstream | 107509 | 14917996 ~ 14932094 (-) | False | sh3tc2 |
| XM_034306010.1 | mRNA | downstream | 107509 | 14917996 ~ 14932094 (-) | False | sh3tc2 |
| XM_034306003.1 | mRNA | downstream | 107509 | 14917996 ~ 14932094 (-) | False | sh3tc2 |
| XM_026917548.2 | mRNA | upstream | 8861 | 15051360 ~ 15053378 (-) | True | foxi3b |
| XM_034305634.1 | mRNA | upstream | 27324 | 15069823 ~ 15071886 (-) | True | LOC113528773 |
| XM_034305633.1 | mRNA | upstream | 27324 | 15069823 ~ 15071870 (-) | False | LOC113528773 |
| XM_034305631.1 | mRNA | upstream | 29499 | 15071998 ~ 15076599 (-) | False | LOC113528772 |
| XM_026917477.2 | mRNA | upstream | 29499 | 15071998 ~ 15076305 (-) | True | LOC113528772 |
| trnav-uac | other | downstream | 570978 | 14468553 ~ 14468625 (-) | True | trnav-uac |
| TU135547 | other | downstream | 817748 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnae-uuc_1 | other | downstream | 830616 | 14208916 ~ 14208987 (-) | True | trnae-uuc_1 |
| TU135100 | other | downstream | 1488828 | 13547512 ~ 13550775 (-) | True | G114460 |
| TU134829 | other | downstream | 2344094 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU136727 | other | upstream | 808522 | 15851021 ~ 15852220 (-) | True | G115842 |
| TU136942 | other | upstream | 1026236 | 16068735 ~ 16071362 (-) | True | G116014 |
| TU136943 | other | upstream | 1026236 | 16068735 ~ 16071362 (-) | False | G116014 |
| XR_004578451.1 | other | upstream | 1064280 | 16106779 ~ 16115433 (-) | True | arr3b |
| XR_004578453.1 | other | upstream | 1483131 | 16525630 ~ 16550675 (-) | False | zic6 |
