Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940758.2 |
| length | 1254 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 8 |
| gene id | slbp |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 8473671 ~ 8478954 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K18710 | SLBP; histone RNA hairpin-binding protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131665 | lncRNA | downstream | 108089 | 8362373 ~ 8365582 (-) | True | LOC113542918 |
| TU131666 | lncRNA | downstream | 108801 | 8362373 ~ 8364870 (-) | False | LOC113542918 |
| TU131695 | lncRNA | downstream | 115782 | 8356402 ~ 8357889 (-) | False | LOC113542919 |
| TU131697 | lncRNA | downstream | 118659 | 8346968 ~ 8355012 (-) | True | G111438 |
| TU131673 | lncRNA | downstream | 159359 | 8314026 ~ 8314312 (-) | True | G111414 |
| XR_003404361.2 | lncRNA | upstream | 2244 | 8481198 ~ 8483677 (-) | True | LOC113542922 |
| TU131811 | lncRNA | upstream | 2246 | 8481200 ~ 8483664 (-) | False | LOC113542922 |
| XR_003404369.2 | lncRNA | upstream | 3825 | 8482779 ~ 8482981 (-) | True | LOC113542949 |
| TU131827 | lncRNA | upstream | 7136 | 8486090 ~ 8486321 (-) | True | G111532 |
| TU131843 | lncRNA | upstream | 78391 | 8557345 ~ 8557706 (-) | True | G111548 |
| XM_034306212.1 | mRNA | downstream | 1058 | 8462550 ~ 8472613 (-) | True | ccdc142 |
| XM_026940692.2 | mRNA | downstream | 1059 | 8462550 ~ 8472612 (-) | False | ccdc142 |
| XM_026940744.2 | mRNA | downstream | 77881 | 8392281 ~ 8395790 (-) | False | nkx1.2lb |
| XM_026940743.2 | mRNA | downstream | 77881 | 8392281 ~ 8395790 (-) | True | nkx1.2lb |
| XM_026940772.2 | mRNA | downstream | 109020 | 8362373 ~ 8364651 (-) | False | LOC113542918 |
| XM_026940696.2 | mRNA | upstream | 7882 | 8486836 ~ 8503034 (-) | True | fhdc2 |
| XM_026940770.2 | mRNA | upstream | 75612 | 8554566 ~ 8557276 (-) | True | cetn2 |
| XM_026940731.2 | mRNA | upstream | 110386 | 8589340 ~ 8594245 (-) | False | fut11 |
| XM_034306206.1 | mRNA | upstream | 110386 | 8589340 ~ 8594105 (-) | False | fut11 |
| XM_034306207.1 | mRNA | upstream | 110386 | 8589340 ~ 8594105 (-) | True | fut11 |
| TU130424 | other | downstream | 2645113 | 5826230 ~ 5828558 (-) | True | G110290 |
| TU130314 | other | downstream | 2675735 | 5793847 ~ 5797936 (-) | True | G110204 |
| TU130235 | other | downstream | 2784832 | 5687579 ~ 5688839 (-) | False | zgc:113229 |
| TU129845 | other | downstream | 3255652 | 5204762 ~ 5218019 (-) | True | G109827 |
| trnaa-ugc_1 | other | downstream | 4076804 | 4396796 ~ 4396867 (-) | True | trnaa-ugc_1 |
| XR_003404370.1 | other | upstream | 3041 | 8481995 ~ 8482063 (-) | True | LOC113542950 |
| XR_003404336.2 | other | upstream | 1108874 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| XR_003404347.2 | other | upstream | 2781155 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| TU133937 | other | upstream | 2880184 | 11359138 ~ 11359579 (-) | True | G113398 |
| TU134062 | other | upstream | 3133019 | 11611973 ~ 11612569 (-) | True | G113516 |
