Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034305661.1 |
| length | 833 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC117597634 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 12079524 ~ 12112216 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134458 | lncRNA | downstream | 51490 | 12021998 ~ 12057353 (-) | True | G113889 |
| TU134462 | lncRNA | downstream | 90569 | 12018054 ~ 12018274 (-) | True | G113893 |
| TU134308 | lncRNA | downstream | 101348 | 12007293 ~ 12007495 (-) | True | G113756 |
| TU134267 | lncRNA | downstream | 142109 | 11966027 ~ 11966734 (-) | True | G113715 |
| TU134264 | lncRNA | downstream | 146101 | 11960139 ~ 11962742 (-) | True | G113712 |
| TU134520 | lncRNA | upstream | 57421 | 12169629 ~ 12174833 (-) | False | LOC113542864 |
| TU134521 | lncRNA | upstream | 57421 | 12169629 ~ 12174833 (-) | True | LOC113542864 |
| TU134525 | lncRNA | upstream | 69157 | 12181365 ~ 12183096 (-) | True | G113954 |
| TU134554 | lncRNA | upstream | 146007 | 12258215 ~ 12263170 (-) | True | G113972 |
| TU134561 | lncRNA | upstream | 166614 | 12278822 ~ 12283054 (-) | True | G113979 |
| XM_026940548.2 | mRNA | downstream | 45706 | 12025781 ~ 12063137 (-) | True | hdac3 |
| XM_034306017.1 | mRNA | downstream | 45753 | 12025781 ~ 12063090 (-) | False | hdac3 |
| XM_026940470.2 | mRNA | downstream | 565119 | 11481891 ~ 11543724 (-) | False | LOC113542750 |
| XM_026940471.2 | mRNA | downstream | 565737 | 11481891 ~ 11543106 (-) | False | LOC113542750 |
| XM_026940472.2 | mRNA | downstream | 577869 | 11481891 ~ 11530974 (-) | True | LOC113542750 |
| XM_026940665.2 | mRNA | upstream | 57500 | 12169708 ~ 12174905 (-) | False | LOC113542864 |
| XM_026940666.2 | mRNA | upstream | 57500 | 12169708 ~ 12174897 (-) | False | LOC113542864 |
| XM_034306173.1 | mRNA | upstream | 185958 | 12298166 ~ 12310163 (-) | True | LOC117597734 |
| XM_034306174.1 | mRNA | upstream | 185958 | 12298166 ~ 12310159 (-) | False | LOC117597734 |
| XM_034305794.1 | mRNA | upstream | 325631 | 12437839 ~ 12492799 (-) | False | btk |
| TU134224 | other | downstream | 250827 | 11818878 ~ 11858016 (-) | True | G113674 |
| TU134062 | other | downstream | 496274 | 11611973 ~ 11612569 (-) | True | G113516 |
| TU133937 | other | downstream | 749264 | 11359138 ~ 11359579 (-) | True | G113398 |
| XR_003404347.2 | other | downstream | 783375 | 11260109 ~ 11325468 (-) | False | LOC113542749 |
| XR_003404336.2 | other | downstream | 2515518 | 9587828 ~ 9593325 (-) | False | si:ch211-153b23.4 |
| TU134531 | other | upstream | 209123 | 12321331 ~ 12350528 (-) | False | G113959 |
| TU134534 | other | upstream | 220548 | 12332756 ~ 12362272 (-) | False | G113959 |
| TU134600 | other | upstream | 311520 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU134687 | other | upstream | 388763 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134690 | other | upstream | 404150 | 12516358 ~ 12518194 (-) | True | G114097 |
