Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-uuc_1 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | trnae-uuc_1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 14208916 ~ 14208987 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135417 | lncRNA | downstream | 174021 | 14034642 ~ 14034895 (-) | True | G114761 |
| TU135395 | lncRNA | downstream | 220106 | 13988570 ~ 13988810 (-) | True | G114739 |
| TU135385 | lncRNA | downstream | 232990 | 13975725 ~ 13975926 (-) | True | G114729 |
| TU135363 | lncRNA | downstream | 298995 | 13908968 ~ 13909921 (-) | True | G114707 |
| TU135356 | lncRNA | downstream | 366253 | 13841629 ~ 13842663 (-) | False | pcdh19 |
| TU135784 | lncRNA | upstream | 259263 | 14468250 ~ 14474465 (-) | True | G115100 |
| TU135841 | lncRNA | upstream | 331121 | 14540108 ~ 14540308 (-) | True | G115143 |
| TU136092 | lncRNA | upstream | 536952 | 14745939 ~ 14747993 (-) | True | G115325 |
| TU136072 | lncRNA | upstream | 546347 | 14755334 ~ 14772803 (-) | False | ebf1a |
| TU136097 | lncRNA | upstream | 576342 | 14785329 ~ 14786018 (-) | True | G115329 |
| XM_026917810.2 | mRNA | downstream | 451 | 14168835 ~ 14208465 (-) | True | elf1 |
| XM_026917812.2 | mRNA | downstream | 10697 | 14168835 ~ 14198219 (-) | False | elf1 |
| XM_026917809.2 | mRNA | downstream | 10698 | 14168835 ~ 14198218 (-) | False | elf1 |
| XM_034305911.1 | mRNA | downstream | 12486 | 14168835 ~ 14196430 (-) | False | elf1 |
| XM_026917811.2 | mRNA | downstream | 21218 | 14168835 ~ 14187698 (-) | False | elf1 |
| XM_026917775.2 | mRNA | upstream | 38085 | 14247072 ~ 14383606 (-) | False | drp2 |
| XM_034305852.1 | mRNA | upstream | 38085 | 14247072 ~ 14341496 (-) | False | drp2 |
| XM_026917773.2 | mRNA | upstream | 38086 | 14247073 ~ 14383606 (-) | False | drp2 |
| XM_026917772.2 | mRNA | upstream | 38086 | 14247073 ~ 14383606 (-) | True | drp2 |
| XM_026917774.2 | mRNA | upstream | 38086 | 14247073 ~ 14313289 (-) | False | drp2 |
| TU135100 | other | downstream | 658141 | 13547512 ~ 13550775 (-) | True | G114460 |
| TU134829 | other | downstream | 1513407 | 12694771 ~ 12695509 (-) | True | G114215 |
| TU134690 | other | downstream | 1690722 | 12516358 ~ 12518194 (-) | True | G114097 |
| TU134687 | other | downstream | 1704115 | 12500971 ~ 12504801 (-) | False | timm8a |
| TU134600 | other | downstream | 1784859 | 12423728 ~ 12424057 (-) | True | G114013 |
| TU135547 | other | upstream | 11329 | 14220316 ~ 14221855 (-) | True | G114873 |
| trnav-uac | other | upstream | 259566 | 14468553 ~ 14468625 (-) | True | trnav-uac |
| TU136727 | other | upstream | 1642034 | 15851021 ~ 15852220 (-) | True | G115842 |
| TU136942 | other | upstream | 1859748 | 16068735 ~ 16071362 (-) | True | G116014 |
| TU136943 | other | upstream | 1859748 | 16068735 ~ 16071362 (-) | False | G116014 |
