Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15018 |
| length | 551 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 4 |
| gene id | G12656 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 22749613 ~ 22753941 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15000 | lncRNA | downstream | 58087 | 22691288 ~ 22691526 (-) | True | G12642 |
| TU14999 | lncRNA | downstream | 58420 | 22690971 ~ 22691193 (-) | True | G12641 |
| TU14997 | lncRNA | downstream | 59428 | 22689976 ~ 22690185 (-) | True | G12639 |
| TU14995 | lncRNA | downstream | 60399 | 22688220 ~ 22689214 (-) | False | aicda |
| TU14840 | lncRNA | downstream | 415009 | 22333125 ~ 22334604 (-) | True | G12498 |
| TU15019 | lncRNA | upstream | 797 | 22754738 ~ 22756614 (-) | True | G12657 |
| TU15180 | lncRNA | upstream | 71059 | 22825000 ~ 22829871 (-) | True | G12797 |
| TU15188 | lncRNA | upstream | 109544 | 22863485 ~ 22864018 (-) | True | G12805 |
| TU15191 | lncRNA | upstream | 115218 | 22869159 ~ 22869411 (-) | True | G12808 |
| TU15200 | lncRNA | upstream | 165344 | 22919285 ~ 22928564 (-) | True | G12816 |
| XM_026939992.2 | mRNA | downstream | 3548 | 22731675 ~ 22746065 (-) | True | rasip1 |
| XM_026940182.2 | mRNA | downstream | 40240 | 22704222 ~ 22709373 (-) | True | il11a |
| XM_026940104.2 | mRNA | downstream | 46938 | 22695703 ~ 22702675 (-) | True | znf628 |
| XM_026940004.2 | mRNA | downstream | 54084 | 22693318 ~ 22695529 (-) | True | nat14 |
| XM_034304251.1 | mRNA | downstream | 61364 | 22686407 ~ 22688249 (-) | False | aicda |
| XM_034304191.1 | mRNA | upstream | 106324 | 22860265 ~ 22872115 (-) | False | LOC113542546 |
| XM_034304188.1 | mRNA | upstream | 106324 | 22860265 ~ 22872115 (-) | True | LOC113542546 |
| XM_034304197.1 | mRNA | upstream | 106324 | 22860265 ~ 22872114 (-) | False | LOC113542546 |
| XM_026940145.2 | mRNA | upstream | 121746 | 22875687 ~ 22885619 (-) | True | LOC113542545 |
| XM_026940144.2 | mRNA | upstream | 121746 | 22875687 ~ 22885614 (-) | False | LOC113542545 |
| XR_004578404.1 | other | downstream | 1474272 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 2925930 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 3002730 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| trnaq-uug | other | downstream | 3003673 | 19745869 ~ 19745940 (-) | False | trnaq-uug |
| XR_004578458.1 | other | downstream | 3046453 | 19702611 ~ 19703160 (-) | True | LOC117597712 |
| TU15196 | other | upstream | 147410 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | upstream | 147410 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| TU16308 | other | upstream | 1482351 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 1637589 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 1781919 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
