Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15191 |
| length | 253 |
| lncRNA type | intronic |
| GC content | 0.27 |
| exon number | 1 |
| gene id | G12808 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 22869159 ~ 22869411 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15188 | lncRNA | downstream | 5141 | 22863485 ~ 22864018 (-) | True | G12805 |
| TU15180 | lncRNA | downstream | 39288 | 22825000 ~ 22829871 (-) | True | G12797 |
| TU15019 | lncRNA | downstream | 112545 | 22754738 ~ 22756614 (-) | True | G12657 |
| TU15016 | lncRNA | downstream | 115218 | 22749613 ~ 22753941 (-) | False | G12656 |
| TU15200 | lncRNA | upstream | 49874 | 22919285 ~ 22928564 (-) | True | G12816 |
| TU15203 | lncRNA | upstream | 68815 | 22938226 ~ 22938796 (-) | True | G12819 |
| TU15307 | lncRNA | upstream | 251199 | 23120610 ~ 23121495 (-) | False | LOC113542417 |
| TU15311 | lncRNA | upstream | 261864 | 23131275 ~ 23131498 (-) | True | G12917 |
| TU15401 | lncRNA | upstream | 263515 | 23132926 ~ 23165584 (-) | True | cxcr3.2 |
| XM_026939992.2 | mRNA | downstream | 123094 | 22731675 ~ 22746065 (-) | True | rasip1 |
| XM_026940182.2 | mRNA | downstream | 159786 | 22704222 ~ 22709373 (-) | True | il11a |
| XM_026940104.2 | mRNA | downstream | 166484 | 22695703 ~ 22702675 (-) | True | znf628 |
| XM_026940004.2 | mRNA | downstream | 173630 | 22693318 ~ 22695529 (-) | True | nat14 |
| XM_034304251.1 | mRNA | downstream | 180910 | 22686407 ~ 22688249 (-) | False | aicda |
| XM_026940145.2 | mRNA | upstream | 6276 | 22875687 ~ 22885619 (-) | True | LOC113542545 |
| XM_026940144.2 | mRNA | upstream | 6276 | 22875687 ~ 22885614 (-) | False | LOC113542545 |
| XM_026940149.2 | mRNA | upstream | 17783 | 22887194 ~ 22892627 (-) | True | LOC113542547 |
| XM_026940272.2 | mRNA | upstream | 32823 | 22902234 ~ 22908140 (-) | False | zgc:92606 |
| XM_026940066.2 | mRNA | upstream | 56142 | 22925553 ~ 22931345 (-) | True | tpi1b |
| XR_004578404.1 | other | downstream | 1593818 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 3045476 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 3122276 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| trnaq-uug | other | downstream | 3123219 | 19745869 ~ 19745940 (-) | False | trnaq-uug |
| XR_004578458.1 | other | downstream | 3165999 | 19702611 ~ 19703160 (-) | True | LOC117597712 |
| TU15196 | other | upstream | 31940 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | upstream | 31940 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| TU16308 | other | upstream | 1366881 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 1522119 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 1666449 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
