Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15881 |
| length | 251 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G13369 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 23527690 ~ 23527940 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15873 | lncRNA | downstream | 21392 | 23506020 ~ 23506298 (-) | True | G13361 |
| TU15865 | lncRNA | downstream | 27699 | 23477319 ~ 23499991 (-) | False | cicb |
| TU15401 | lncRNA | downstream | 362106 | 23132926 ~ 23165584 (-) | True | cxcr3.2 |
| TU15311 | lncRNA | downstream | 396192 | 23131275 ~ 23131498 (-) | True | G12917 |
| TU15307 | lncRNA | downstream | 406195 | 23120610 ~ 23121495 (-) | False | LOC113542417 |
| TU15915 | lncRNA | upstream | 145847 | 23673787 ~ 23674145 (-) | False | dedd1 |
| TU15941 | lncRNA | upstream | 286337 | 23814277 ~ 23816058 (-) | True | G13424 |
| TU15956 | lncRNA | upstream | 383139 | 23911079 ~ 23912280 (-) | True | G13438 |
| TU15974 | lncRNA | upstream | 493590 | 24021530 ~ 24021918 (-) | True | G13452 |
| TU15987 | lncRNA | upstream | 514314 | 24042254 ~ 24042606 (-) | True | G13465 |
| XM_026939565.2 | mRNA | downstream | 367 | 23477158 ~ 23527323 (-) | False | cicb |
| XM_026939564.2 | mRNA | downstream | 367 | 23477158 ~ 23527323 (-) | True | cicb |
| XM_034308306.1 | mRNA | downstream | 4750 | 23477158 ~ 23522940 (-) | False | cicb |
| XM_026939566.2 | mRNA | downstream | 27596 | 23477158 ~ 23500094 (-) | False | cicb |
| XM_026939704.2 | mRNA | downstream | 59778 | 23449585 ~ 23467912 (-) | False | gsk3ab |
| XM_026939888.2 | mRNA | upstream | 9879 | 23537819 ~ 23579291 (-) | True | erfl3 |
| XM_034307000.1 | mRNA | upstream | 64639 | 23592579 ~ 23634924 (-) | False | pou2f2a |
| XM_026940160.2 | mRNA | upstream | 64639 | 23592579 ~ 23634924 (-) | False | pou2f2a |
| XM_026940159.2 | mRNA | upstream | 64639 | 23592579 ~ 23634924 (-) | True | pou2f2a |
| XM_034307004.1 | mRNA | upstream | 64639 | 23592579 ~ 23609961 (-) | False | pou2f2a |
| TU15196 | other | downstream | 619588 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | downstream | 619588 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| XR_004578404.1 | other | downstream | 2252349 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 3704007 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 3780807 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| TU16308 | other | upstream | 708352 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 863590 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 1007920 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| TU16925 | other | upstream | 1872816 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 1872816 | 25400756 ~ 25404306 (-) | False | G14258 |
