Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15915 |
| length | 303 |
| lncRNA type | sense_over |
| GC content | 0.28 |
| exon number | 2 |
| gene id | dedd1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 23659523 ~ 23674479 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15881 | lncRNA | downstream | 145847 | 23527690 ~ 23527940 (-) | True | G13369 |
| TU15873 | lncRNA | downstream | 167489 | 23506020 ~ 23506298 (-) | True | G13361 |
| TU15865 | lncRNA | downstream | 173796 | 23477319 ~ 23499991 (-) | False | cicb |
| TU15401 | lncRNA | downstream | 508203 | 23132926 ~ 23165584 (-) | True | cxcr3.2 |
| TU15311 | lncRNA | downstream | 542289 | 23131275 ~ 23131498 (-) | True | G12917 |
| TU15941 | lncRNA | upstream | 140132 | 23814277 ~ 23816058 (-) | True | G13424 |
| TU15956 | lncRNA | upstream | 236934 | 23911079 ~ 23912280 (-) | True | G13438 |
| TU15974 | lncRNA | upstream | 347385 | 24021530 ~ 24021918 (-) | True | G13452 |
| TU15987 | lncRNA | upstream | 368109 | 24042254 ~ 24042606 (-) | True | G13465 |
| TU15989 | lncRNA | upstream | 369299 | 24043444 ~ 24043657 (-) | True | G13467 |
| XM_034307012.1 | mRNA | downstream | 38862 | 23593863 ~ 23634925 (-) | False | pou2f2a |
| XM_034307000.1 | mRNA | downstream | 38863 | 23592579 ~ 23634924 (-) | False | pou2f2a |
| XM_026940160.2 | mRNA | downstream | 38863 | 23592579 ~ 23634924 (-) | False | pou2f2a |
| XM_026940159.2 | mRNA | downstream | 38863 | 23592579 ~ 23634924 (-) | True | pou2f2a |
| XM_034307004.1 | mRNA | downstream | 63826 | 23592579 ~ 23609961 (-) | False | pou2f2a |
| XM_026939759.2 | mRNA | upstream | 6147 | 23680292 ~ 23702357 (-) | False | atp1a3b |
| XM_026939758.2 | mRNA | upstream | 6147 | 23680292 ~ 23702357 (-) | True | atp1a3b |
| XM_026940071.2 | mRNA | upstream | 57457 | 23731602 ~ 23795116 (-) | False | si:ch73-22o12.1 |
| XM_026940070.2 | mRNA | upstream | 87228 | 23761373 ~ 23795116 (-) | True | si:ch73-22o12.1 |
| XM_026940049.2 | mRNA | upstream | 153293 | 23827438 ~ 23847366 (-) | True | vars1 |
| TU15196 | other | downstream | 765685 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | downstream | 765685 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| XR_004578404.1 | other | downstream | 2398446 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 3850104 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 3926904 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| TU16308 | other | upstream | 562147 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 717385 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 861715 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| TU16925 | other | upstream | 1726611 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 1726611 | 25400756 ~ 25404306 (-) | False | G14258 |
