Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15941 |
| length | 281 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G13424 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 23814277 ~ 23816058 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15915 | lncRNA | downstream | 140132 | 23673787 ~ 23674145 (-) | False | dedd1 |
| TU15881 | lncRNA | downstream | 286337 | 23527690 ~ 23527940 (-) | True | G13369 |
| TU15873 | lncRNA | downstream | 307979 | 23506020 ~ 23506298 (-) | True | G13361 |
| TU15865 | lncRNA | downstream | 314286 | 23477319 ~ 23499991 (-) | False | cicb |
| TU15401 | lncRNA | downstream | 648693 | 23132926 ~ 23165584 (-) | True | cxcr3.2 |
| TU15956 | lncRNA | upstream | 95021 | 23911079 ~ 23912280 (-) | True | G13438 |
| TU15974 | lncRNA | upstream | 205472 | 24021530 ~ 24021918 (-) | True | G13452 |
| TU15987 | lncRNA | upstream | 226196 | 24042254 ~ 24042606 (-) | True | G13465 |
| TU15989 | lncRNA | upstream | 227386 | 24043444 ~ 24043657 (-) | True | G13467 |
| TU15992 | lncRNA | upstream | 232045 | 24048103 ~ 24049565 (-) | True | G13468 |
| XM_026940071.2 | mRNA | downstream | 19161 | 23731602 ~ 23795116 (-) | False | si:ch73-22o12.1 |
| XM_026940070.2 | mRNA | downstream | 19161 | 23761373 ~ 23795116 (-) | True | si:ch73-22o12.1 |
| XM_026939759.2 | mRNA | downstream | 111920 | 23680292 ~ 23702357 (-) | False | atp1a3b |
| XM_026939758.2 | mRNA | downstream | 111920 | 23680292 ~ 23702357 (-) | True | atp1a3b |
| XM_026939999.2 | mRNA | downstream | 139798 | 23659523 ~ 23674479 (-) | False | dedd1 |
| XM_026940049.2 | mRNA | upstream | 11380 | 23827438 ~ 23847366 (-) | True | vars1 |
| XM_026939644.2 | mRNA | upstream | 34705 | 23850763 ~ 23853697 (-) | True | LOC113542255 |
| XM_034308137.1 | mRNA | upstream | 40025 | 23856083 ~ 23862923 (-) | True | ino80e |
| XM_026940054.2 | mRNA | upstream | 56874 | 23872932 ~ 23891281 (-) | False | si:dkeyp-77h1.4 |
| XM_026940057.2 | mRNA | upstream | 56874 | 23872932 ~ 23891001 (-) | True | si:dkeyp-77h1.4 |
| TU15196 | other | downstream | 906175 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | downstream | 906175 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| XR_004578404.1 | other | downstream | 2538936 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 3990594 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 4067394 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| TU16308 | other | upstream | 420234 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 575472 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 719802 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| TU16925 | other | upstream | 1584698 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 1584698 | 25400756 ~ 25404306 (-) | False | G14258 |
