Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU15993 |
| length | 587 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G13468 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 24048103 ~ 24049660 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15989 | lncRNA | downstream | 5322 | 24043444 ~ 24043657 (-) | True | G13467 |
| TU15987 | lncRNA | downstream | 6373 | 24042254 ~ 24042606 (-) | True | G13465 |
| TU15974 | lncRNA | downstream | 27061 | 24021530 ~ 24021918 (-) | True | G13452 |
| TU15956 | lncRNA | downstream | 136699 | 23911079 ~ 23912280 (-) | True | G13438 |
| TU15941 | lncRNA | downstream | 232921 | 23814277 ~ 23816058 (-) | True | G13424 |
| TU16259 | lncRNA | upstream | 67425 | 24116990 ~ 24120764 (-) | True | G13693 |
| TU16274 | lncRNA | upstream | 93277 | 24142842 ~ 24149234 (-) | False | LOC113542286 |
| TU16276 | lncRNA | upstream | 102140 | 24151705 ~ 24152851 (-) | True | G13703 |
| XR_004577828.1 | lncRNA | upstream | 139190 | 24188755 ~ 24198379 (-) | False | LOC113542360 |
| XR_004577827.1 | lncRNA | upstream | 139190 | 24188755 ~ 24198379 (-) | True | LOC113542360 |
| XM_026939896.2 | mRNA | downstream | 27920 | 24002476 ~ 24021059 (-) | False | znf384b |
| XM_026939894.2 | mRNA | downstream | 27920 | 24002476 ~ 24021059 (-) | False | znf384b |
| XM_026939898.2 | mRNA | downstream | 27922 | 24002476 ~ 24021057 (-) | False | znf384b |
| XM_026939897.2 | mRNA | downstream | 28316 | 24002476 ~ 24020663 (-) | False | znf384b |
| XM_026939895.2 | mRNA | downstream | 28316 | 24002476 ~ 24020663 (-) | True | znf384b |
| XM_026940283.2 | mRNA | upstream | 841 | 24050406 ~ 24063207 (-) | True | cops7a |
| XM_026940295.2 | mRNA | upstream | 15159 | 24064724 ~ 24069667 (-) | True | si:ch73-86n18.1 |
| XM_026940006.2 | mRNA | upstream | 21078 | 24070643 ~ 24075271 (-) | True | trim108 |
| XM_026940005.2 | mRNA | upstream | 33285 | 24082850 ~ 24103169 (-) | True | setdb1b |
| XM_034314232.1 | mRNA | upstream | 71299 | 24120864 ~ 24139160 (-) | True | otoa |
| TU15196 | other | downstream | 1140877 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | downstream | 1140877 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| XR_004578404.1 | other | downstream | 2773638 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 4225296 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 4302096 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| TU16308 | other | upstream | 186727 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 341965 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 486295 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| TU16925 | other | upstream | 1351191 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 1351191 | 25400756 ~ 25404306 (-) | False | G14258 |
