Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU16932 |
| length | 1062 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G14258 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 25400756 ~ 25404306 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17178 | lncRNA | downstream | 3592 | 25395487 ~ 25397164 (-) | False | bcam |
| TU17174 | lncRNA | downstream | 10096 | 25388043 ~ 25390660 (-) | True | G14439 |
| TU17175 | lncRNA | downstream | 10096 | 25388043 ~ 25390660 (-) | False | G14439 |
| TU17176 | lncRNA | downstream | 10096 | 25388043 ~ 25390660 (-) | False | G14439 |
| TU17147 | lncRNA | downstream | 23711 | 25359292 ~ 25377045 (-) | False | G14435 |
| TU17191 | lncRNA | upstream | 3772 | 25408078 ~ 25411719 (-) | False | G14444 |
| TU17193 | lncRNA | upstream | 3772 | 25408078 ~ 25429510 (-) | True | G14444 |
| XR_003404619.2 | lncRNA | upstream | 94221 | 25498527 ~ 25511252 (-) | True | LOC113545502 |
| TU17202 | lncRNA | upstream | 146832 | 25551138 ~ 25556770 (-) | False | cadm4 |
| TU17220 | lncRNA | upstream | 231798 | 25636104 ~ 25696835 (-) | True | G14464 |
| XM_026944882.2 | mRNA | downstream | 64147 | 25335601 ~ 25336609 (-) | True | LOC113545493 |
| XM_034305958.1 | mRNA | downstream | 67048 | 25318286 ~ 25333708 (-) | False | osgin2 |
| XM_026944769.2 | mRNA | upstream | 33561 | 25437867 ~ 25487424 (-) | True | bcam |
| XM_026944770.2 | mRNA | upstream | 33561 | 25437867 ~ 25487423 (-) | False | bcam |
| XM_026944771.2 | mRNA | upstream | 39671 | 25443977 ~ 25487425 (-) | False | bcam |
| XM_026944870.2 | mRNA | upstream | 117183 | 25521489 ~ 25527931 (-) | False | rps19 |
| XM_026944871.2 | mRNA | upstream | 117183 | 25521489 ~ 25527931 (-) | True | rps19 |
| TU16407 | other | downstream | 853919 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| XR_004578322.1 | other | downstream | 1000001 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16308 | other | downstream | 1160677 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| TU15196 | other | downstream | 2492654 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| XR_004578410.1 | other | upstream | 142728 | 25547034 ~ 25589703 (-) | False | cadm4 |
| XR_004578411.1 | other | upstream | 142751 | 25547057 ~ 25589703 (-) | False | cadm4 |
| XR_004578761.1 | other | upstream | 1062505 | 26466811 ~ 26512297 (-) | False | LOC113545420 |
| trnar-ccu | other | upstream | 2841036 | 28245342 ~ 28245414 (-) | True | trnar-ccu |
| trnam-cau | other | upstream | 2841584 | 28245890 ~ 28245961 (-) | True | trnam-cau |
