Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU16983 |
| length | 749 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G14303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 25063468 ~ 25065486 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16439 | lncRNA | downstream | 344616 | 24713989 ~ 24718852 (-) | True | G13834 |
| TU16374 | lncRNA | downstream | 367451 | 24440646 ~ 24696017 (-) | True | G13780 |
| TU16422 | lncRNA | downstream | 443519 | 24614253 ~ 24619949 (-) | True | G13819 |
| TU16411 | lncRNA | downstream | 485221 | 24573099 ~ 24578247 (-) | False | pbxip1b |
| TU16416 | lncRNA | downstream | 507856 | 24552427 ~ 24555612 (-) | False | LOC113542209 |
| TU17001 | lncRNA | upstream | 33916 | 25099402 ~ 25101229 (-) | False | G14315 |
| TU17003 | lncRNA | upstream | 33916 | 25099402 ~ 25101229 (-) | True | G14315 |
| TU17022 | lncRNA | upstream | 80355 | 25145841 ~ 25148263 (-) | True | G14333 |
| TU17053 | lncRNA | upstream | 196554 | 25262040 ~ 25266696 (-) | False | rps27.2 |
| TU17138 | lncRNA | upstream | 284933 | 25350419 ~ 25377045 (-) | False | G14435 |
| XM_026944707.2 | mRNA | downstream | 10488 | 25035405 ~ 25052980 (-) | False | trim46a |
| XM_026944706.2 | mRNA | downstream | 10673 | 25035405 ~ 25052795 (-) | False | trim46a |
| XM_034307269.1 | mRNA | downstream | 10673 | 25035405 ~ 25052795 (-) | True | trim46a |
| XM_026944708.2 | mRNA | downstream | 10673 | 25039182 ~ 25052795 (-) | False | trim46a |
| XM_026944847.2 | mRNA | downstream | 255539 | 24770276 ~ 24807929 (-) | False | si:dkey-246i14.3 |
| XM_026944856.2 | mRNA | upstream | 196616 | 25262102 ~ 25266771 (-) | True | rps27.2 |
| XM_034305958.1 | mRNA | upstream | 252800 | 25318286 ~ 25333708 (-) | False | osgin2 |
| XM_026944718.2 | mRNA | upstream | 252800 | 25318286 ~ 25333708 (-) | True | osgin2 |
| XM_034305963.1 | mRNA | upstream | 252800 | 25318286 ~ 25333100 (-) | False | osgin2 |
| XM_034305955.1 | mRNA | upstream | 252800 | 25318286 ~ 25333099 (-) | False | osgin2 |
| TU16407 | other | downstream | 516631 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| XR_004578322.1 | other | downstream | 662713 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16308 | other | downstream | 823389 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| TU15196 | other | downstream | 2155366 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU16925 | other | upstream | 335270 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 335270 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16922 | other | upstream | 336459 | 25401945 ~ 25404306 (-) | False | G14258 |
| XR_004578410.1 | other | upstream | 481548 | 25547034 ~ 25589703 (-) | False | cadm4 |
| XR_004578411.1 | other | upstream | 481571 | 25547057 ~ 25589703 (-) | False | cadm4 |
