Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU17178 |
| length | 895 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | bcam |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 25395487 ~ 25487425 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17174 | lncRNA | downstream | 4827 | 25388043 ~ 25390660 (-) | True | G14439 |
| TU17175 | lncRNA | downstream | 4827 | 25388043 ~ 25390660 (-) | False | G14439 |
| TU17176 | lncRNA | downstream | 4827 | 25388043 ~ 25390660 (-) | False | G14439 |
| TU17150 | lncRNA | downstream | 17948 | 25353418 ~ 25377539 (-) | False | G14435 |
| TU17168 | lncRNA | downstream | 18442 | 25350419 ~ 25377045 (-) | False | G14435 |
| TU16935 | lncRNA | upstream | 2710 | 25399874 ~ 25401222 (-) | True | G14259 |
| TU16932 | lncRNA | upstream | 3592 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16923 | lncRNA | upstream | 4781 | 25401945 ~ 25404306 (-) | True | G14258 |
| TU17191 | lncRNA | upstream | 10914 | 25408078 ~ 25411719 (-) | False | G14444 |
| TU17193 | lncRNA | upstream | 10914 | 25408078 ~ 25429510 (-) | True | G14444 |
| XM_026944882.2 | mRNA | downstream | 58878 | 25335601 ~ 25336609 (-) | True | LOC113545493 |
| XM_034305958.1 | mRNA | downstream | 61779 | 25318286 ~ 25333708 (-) | False | osgin2 |
| XM_026944769.2 | mRNA | upstream | 40703 | 25437867 ~ 25487424 (-) | True | bcam |
| XM_026944770.2 | mRNA | upstream | 40703 | 25437867 ~ 25487423 (-) | False | bcam |
| XM_026944771.2 | mRNA | upstream | 46813 | 25443977 ~ 25487425 (-) | False | bcam |
| XM_026944870.2 | mRNA | upstream | 124325 | 25521489 ~ 25527931 (-) | False | rps19 |
| XM_026944871.2 | mRNA | upstream | 124325 | 25521489 ~ 25527931 (-) | True | rps19 |
| TU16407 | other | downstream | 848650 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| XR_004578322.1 | other | downstream | 994732 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16308 | other | downstream | 1155408 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| TU15196 | other | downstream | 2487385 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU16925 | other | upstream | 3592 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 3592 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16922 | other | upstream | 4781 | 25401945 ~ 25404306 (-) | False | G14258 |
| XR_004578410.1 | other | upstream | 149870 | 25547034 ~ 25589703 (-) | False | cadm4 |
| XR_004578411.1 | other | upstream | 149893 | 25547057 ~ 25589703 (-) | False | cadm4 |
