Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU19688 |
| length | 214 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G16721 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 30249464 ~ 30249677 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04966 | Collecting duct acid secretion |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19674 | lncRNA | downstream | 74100 | 30175024 ~ 30175364 (-) | True | G16709 |
| TU19591 | lncRNA | downstream | 99876 | 30149342 ~ 30149588 (-) | True | G16629 |
| TU19515 | lncRNA | downstream | 296179 | 29873607 ~ 29953285 (-) | True | G16566 |
| TU19531 | lncRNA | downstream | 342040 | 29904478 ~ 29907424 (-) | True | G16582 |
| TU19490 | lncRNA | downstream | 450493 | 29797753 ~ 29798971 (-) | False | pcolce2b |
| TU19714 | lncRNA | upstream | 81720 | 30331397 ~ 30331613 (-) | True | G16747 |
| TU19682 | lncRNA | upstream | 82897 | 30332574 ~ 30333173 (-) | False | gpr158a |
| XR_004578412.1 | lncRNA | upstream | 130167 | 30379844 ~ 30382575 (-) | True | LOC117597677 |
| XR_004578413.1 | lncRNA | upstream | 130190 | 30379867 ~ 30382575 (-) | False | LOC117597677 |
| TU19909 | lncRNA | upstream | 387406 | 30637083 ~ 30637584 (-) | True | G16897 |
| XM_026944840.2 | mRNA | downstream | 41390 | 30193051 ~ 30208074 (-) | True | anxa13 |
| XM_034303618.1 | mRNA | downstream | 59274 | 30189555 ~ 30190190 (-) | True | LOC117597070 |
| XM_034303621.1 | mRNA | downstream | 85767 | 30115305 ~ 30163697 (-) | True | LOC117597071 |
| XM_034304616.1 | mRNA | downstream | 138162 | 30067523 ~ 30111302 (-) | True | myo3a |
| XM_026944833.2 | mRNA | downstream | 188869 | 30026423 ~ 30060595 (-) | True | gad2 |
| XM_026944739.2 | mRNA | upstream | 89273 | 30338950 ~ 30344720 (-) | True | ptchd3a |
| XM_034305542.1 | mRNA | upstream | 150478 | 30400155 ~ 30561913 (-) | False | kmt2ca |
| XM_034305564.1 | mRNA | upstream | 150478 | 30400155 ~ 30561912 (-) | False | kmt2ca |
| XM_034305562.1 | mRNA | upstream | 150478 | 30400155 ~ 30561912 (-) | False | kmt2ca |
| XM_034305536.1 | mRNA | upstream | 150478 | 30400155 ~ 30561912 (-) | True | kmt2ca |
| trnaf-gaa | other | downstream | 260174 | 29989218 ~ 29989290 (-) | True | trnaf-gaa |
| trnar-ccu_3 | other | downstream | 1993147 | 28256245 ~ 28256317 (-) | True | trnar-ccu_3 |
| trnar-ccu_2 | other | downstream | 1993897 | 28255495 ~ 28255567 (-) | True | trnar-ccu_2 |
| trnar-ccu_1 | other | downstream | 1998336 | 28251056 ~ 28251128 (-) | True | trnar-ccu_1 |
| trnam-cau | other | downstream | 2003503 | 28245890 ~ 28245961 (-) | True | trnam-cau |
| trnah-gug | other | upstream | 383389 | 30633066 ~ 30633137 (-) | True | trnah-gug |
| TU19913 | other | upstream | 391021 | 30640698 ~ 30642974 (-) | True | G16900 |
| LOC117595698 | other | upstream | 536286 | 30785963 ~ 30789410 (-) | True | LOC117595698 |
| TU20271 | other | upstream | 743392 | 30993069 ~ 30997169 (-) | False | telo2 |
| TU20272 | other | upstream | 743392 | 30993069 ~ 30996234 (-) | False | telo2 |
