Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU19913 |
| length | 342 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 6 |
| gene id | G16900 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 30640698 ~ 30642974 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576931.1 | lncRNA | downstream | 674 | 30637849 ~ 30640024 (-) | False | LOC117595754 |
| XR_004576936.1 | lncRNA | downstream | 674 | 30637849 ~ 30640024 (-) | True | LOC117595754 |
| TU19909 | lncRNA | downstream | 3114 | 30637083 ~ 30637584 (-) | True | G16897 |
| XR_004578412.1 | lncRNA | downstream | 258123 | 30379844 ~ 30382575 (-) | True | LOC117597677 |
| XR_004578413.1 | lncRNA | downstream | 258123 | 30379867 ~ 30382575 (-) | False | LOC117597677 |
| XR_004577837.1 | lncRNA | upstream | 120611 | 30763585 ~ 30764477 (-) | True | LOC117596846 |
| TU20022 | lncRNA | upstream | 123215 | 30766189 ~ 30766709 (-) | True | G17000 |
| TU20049 | lncRNA | upstream | 198991 | 30841965 ~ 30889214 (-) | True | G17025 |
| TU20248 | lncRNA | upstream | 345149 | 30988123 ~ 30990026 (-) | False | telo2 |
| TU20249 | lncRNA | upstream | 348916 | 30991890 ~ 30992853 (-) | False | telo2 |
| XM_026944717.2 | mRNA | downstream | 54008 | 30582017 ~ 30586690 (-) | True | xrcc2 |
| XM_034305563.1 | mRNA | downstream | 78787 | 30400155 ~ 30561911 (-) | False | kmt2ca |
| XM_026947949.2 | mRNA | upstream | 327043 | 30970017 ~ 30982915 (-) | True | LOC113547558 |
| XM_034308978.1 | mRNA | upstream | 345320 | 30988294 ~ 31014649 (-) | True | telo2 |
| XM_026947966.2 | mRNA | upstream | 523452 | 31166426 ~ 31312036 (-) | False | ntng1a |
| XM_034308038.1 | mRNA | upstream | 523452 | 31166426 ~ 31312036 (-) | False | ntng1a |
| XM_026947963.2 | mRNA | upstream | 523452 | 31166426 ~ 31312036 (-) | True | ntng1a |
| trnah-gug | other | downstream | 7561 | 30633066 ~ 30633137 (-) | True | trnah-gug |
| trnaf-gaa | other | downstream | 651408 | 29989218 ~ 29989290 (-) | True | trnaf-gaa |
| trnar-ccu_3 | other | downstream | 2384381 | 28256245 ~ 28256317 (-) | True | trnar-ccu_3 |
| trnar-ccu_2 | other | downstream | 2385131 | 28255495 ~ 28255567 (-) | True | trnar-ccu_2 |
| trnar-ccu_1 | other | downstream | 2389570 | 28251056 ~ 28251128 (-) | True | trnar-ccu_1 |
| LOC117595698 | other | upstream | 142989 | 30785963 ~ 30789410 (-) | True | LOC117595698 |
| TU20271 | other | upstream | 350095 | 30993069 ~ 30997169 (-) | False | telo2 |
| TU20272 | other | upstream | 350095 | 30993069 ~ 30996234 (-) | False | telo2 |
| TU20251 | other | upstream | 359435 | 31002409 ~ 31003309 (-) | True | G17199 |
| TU20760 | other | upstream | 1357651 | 32000625 ~ 32052554 (-) | True | G17630 |
