Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU21692 |
| length | 442 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G18418 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 33441675 ~ 33442220 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0022402 | cell cycle process | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:1903047 | mitotic cell cycle process | biological_process |
| GO:0000278 | mitotic cell cycle | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU21684 | lncRNA | downstream | 21123 | 33414410 ~ 33420552 (-) | False | G18412 |
| TU21682 | lncRNA | downstream | 26402 | 33413692 ~ 33415273 (-) | True | G18412 |
| XR_004578296.1 | lncRNA | downstream | 27109 | 33413680 ~ 33414566 (-) | True | LOC117597510 |
| TU21559 | lncRNA | downstream | 89493 | 33351964 ~ 33352182 (-) | True | G18323 |
| TU21535 | lncRNA | downstream | 208636 | 33232818 ~ 33233039 (-) | True | G18299 |
| TU21697 | lncRNA | upstream | 7358 | 33449578 ~ 33450920 (-) | True | G18423 |
| TU21699 | lncRNA | upstream | 33201 | 33475421 ~ 33481825 (-) | True | G18425 |
| XR_004578370.1 | lncRNA | upstream | 44674 | 33486894 ~ 33488214 (-) | True | LOC117597603 |
| XR_004578366.1 | lncRNA | upstream | 51520 | 33493740 ~ 33497451 (-) | True | LOC113524631 |
| TU21720 | lncRNA | upstream | 173174 | 33615394 ~ 33616366 (-) | False | dnah3 |
| XM_026946418.1 | mRNA | downstream | 115122 | 33319864 ~ 33326553 (-) | True | fgf21 |
| XM_026946458.2 | mRNA | downstream | 157258 | 33250847 ~ 33284417 (-) | False | mybpc2b |
| XM_026946457.2 | mRNA | downstream | 157258 | 33250847 ~ 33284417 (-) | True | mybpc2b |
| XM_034304680.1 | mRNA | downstream | 469469 | 32958621 ~ 32972206 (-) | True | LOC117597388 |
| XM_034304808.1 | mRNA | downstream | 487744 | 32923867 ~ 32953931 (-) | True | LOC113524649 |
| XM_034305482.1 | mRNA | upstream | 19558 | 33461778 ~ 33472267 (-) | True | LOC113524648 |
| XM_034304692.1 | mRNA | upstream | 57064 | 33499284 ~ 33506987 (-) | True | LOC117595708 |
| XM_034304697.1 | mRNA | upstream | 72275 | 33514495 ~ 33527798 (-) | True | LOC117595702 |
| XM_026910980.2 | mRNA | upstream | 89322 | 33531542 ~ 33546245 (-) | True | LOC113524637 |
| XM_026910981.2 | mRNA | upstream | 89322 | 33531542 ~ 33546215 (-) | False | LOC113524637 |
| TU21290 | other | downstream | 844870 | 32589902 ~ 32596805 (-) | True | G18097 |
| trnar-ccg_3 | other | downstream | 1233978 | 32207625 ~ 32207697 (-) | True | trnar-ccg_3 |
| trnar-ccg_2 | other | downstream | 1355126 | 32086477 ~ 32086549 (-) | True | trnar-ccg_2 |
| trnar-ucg | other | downstream | 1355874 | 32085729 ~ 32085801 (-) | True | trnar-ucg |
| trnar-ccg_1 | other | downstream | 1363060 | 32078543 ~ 32078615 (-) | True | trnar-ccg_1 |
| TU21711 | other | upstream | 129159 | 33571379 ~ 33571830 (-) | True | G18432 |
| TU22331 | other | upstream | 572828 | 34015048 ~ 34016030 (-) | False | G18848 |
| TU22333 | other | upstream | 572828 | 34015048 ~ 34037333 (-) | False | G18848 |
| TU22337 | other | upstream | 572828 | 34015048 ~ 34037333 (-) | True | G18848 |
| TU22338 | other | upstream | 572828 | 34015048 ~ 34016030 (-) | False | G18848 |
