Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22544 |
| length | 1256 |
| lncRNA type | read_through |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC117597397 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 34288562 ~ 34641985 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22508 | lncRNA | downstream | 76851 | 34236237 ~ 34238396 (-) | True | G18987 |
| TU22511 | lncRNA | downstream | 76851 | 34236237 ~ 34238396 (-) | False | G18987 |
| TU22489 | lncRNA | downstream | 110596 | 34202074 ~ 34204651 (-) | True | G18972 |
| TU22474 | lncRNA | downstream | 161989 | 34152488 ~ 34153258 (-) | True | G18960 |
| TU22472 | lncRNA | downstream | 163836 | 34151193 ~ 34151411 (-) | True | G18958 |
| TU22457 | lncRNA | upstream | 818 | 34642803 ~ 34648376 (-) | True | G18943 |
| TU22614 | lncRNA | upstream | 1469 | 34643454 ~ 34651941 (-) | True | G19054 |
| TU22615 | lncRNA | upstream | 1469 | 34643454 ~ 34651941 (-) | False | G19054 |
| TU22613 | lncRNA | upstream | 19693 | 34661678 ~ 34665352 (-) | True | G19053 |
| TU22620 | lncRNA | upstream | 38039 | 34680024 ~ 34762821 (-) | False | G19058 |
| XM_026910985.2 | mRNA | downstream | 44941 | 34266304 ~ 34270306 (-) | True | LOC113524641 |
| XM_034308105.1 | mRNA | downstream | 138253 | 34165120 ~ 34176994 (-) | True | LOC113525220 |
| XM_034311355.1 | mRNA | downstream | 289639 | 34019943 ~ 34025608 (-) | True | nubp2 |
| XM_034304709.1 | mRNA | downstream | 468331 | 33826523 ~ 33846916 (-) | True | LOC113525322 |
| XM_034304704.1 | mRNA | downstream | 503882 | 33772319 ~ 33811365 (-) | True | LOC117597391 |
| XM_034308195.1 | mRNA | upstream | 43445 | 34685430 ~ 34688115 (-) | True | LOC117598307 |
| XM_034308202.1 | mRNA | upstream | 177942 | 34819927 ~ 34820909 (-) | True | LOC117598309 |
| XM_034308337.1 | mRNA | upstream | 195568 | 34837553 ~ 34845305 (-) | True | LOC117598340 |
| XM_034308110.1 | mRNA | upstream | 268691 | 34910676 ~ 34928317 (-) | True | LOC117598289 |
| XM_034308347.1 | mRNA | upstream | 295823 | 34937808 ~ 34943835 (-) | True | LOC113527256 |
| TU22422 | other | downstream | 44963 | 34266314 ~ 34270284 (-) | False | LOC113524641 |
| TU22333 | other | downstream | 277914 | 34015048 ~ 34037333 (-) | False | G18848 |
| TU22337 | other | downstream | 277914 | 34015048 ~ 34037333 (-) | True | G18848 |
| TU22331 | other | downstream | 299217 | 34015048 ~ 34016030 (-) | False | G18848 |
| TU22686 | other | upstream | 310091 | 34952076 ~ 35160443 (-) | True | G19080 |
| XR_004579005.1 | other | upstream | 688281 | 35330266 ~ 35343867 (-) | False | LOC117598337 |
| XR_004579006.1 | other | upstream | 688281 | 35330266 ~ 35343857 (-) | False | LOC117598337 |
| XR_004579008.1 | other | upstream | 688281 | 35330266 ~ 35343715 (-) | True | LOC117598337 |
| TU22756 | other | upstream | 847251 | 35489236 ~ 35516236 (-) | True | G19132 |
