Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034305933.1 |
| length | 1368 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | josd2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 22234336 ~ 22242635 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0021551 | central nervous system morphogenesis | biological_process |
| GO:0008152 | metabolic process | biological_process |
| GO:0008242 | omega peptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14683 | lncRNA | downstream | 274037 | 21872276 ~ 21960299 (-) | True | G12375 |
| XR_003404323.2 | lncRNA | downstream | 296551 | 21934683 ~ 21937785 (-) | True | LOC113542638 |
| XR_004578213.1 | lncRNA | downstream | 296552 | 21934683 ~ 21937784 (-) | False | LOC113542638 |
| XR_003404324.2 | lncRNA | downstream | 296553 | 21934683 ~ 21937783 (-) | False | LOC113542638 |
| TU14687 | lncRNA | downstream | 304193 | 21927459 ~ 21930143 (-) | True | G12377 |
| TU14840 | lncRNA | upstream | 90490 | 22333125 ~ 22334604 (-) | True | G12498 |
| TU14995 | lncRNA | upstream | 445585 | 22688220 ~ 22689214 (-) | False | aicda |
| TU14997 | lncRNA | upstream | 447341 | 22689976 ~ 22690185 (-) | True | G12639 |
| TU14999 | lncRNA | upstream | 448336 | 22690971 ~ 22691193 (-) | True | G12641 |
| TU15000 | lncRNA | upstream | 448653 | 22691288 ~ 22691526 (-) | True | G12642 |
| XM_026939733.2 | mRNA | downstream | 41134 | 22182156 ~ 22193202 (-) | True | flcn |
| XM_026939990.2 | mRNA | downstream | 53843 | 22169927 ~ 22180493 (-) | False | zgc:174888 |
| XM_026939989.2 | mRNA | downstream | 53850 | 22169927 ~ 22180486 (-) | True | zgc:174888 |
| XM_026940228.2 | mRNA | downstream | 73043 | 22155538 ~ 22161293 (-) | True | grwd1 |
| XM_026939829.2 | mRNA | downstream | 90889 | 22141003 ~ 22143447 (-) | True | atg12 |
| XM_026940028.2 | mRNA | upstream | 117250 | 22359885 ~ 22370126 (-) | True | pitpnc1b |
| XM_026939686.2 | mRNA | upstream | 339460 | 22582095 ~ 22589716 (-) | False | cacng6b |
| XM_034304233.1 | mRNA | upstream | 339460 | 22582095 ~ 22589036 (-) | True | cacng6b |
| XM_026940014.2 | mRNA | upstream | 351913 | 22594548 ~ 22602541 (-) | True | u2af2a |
| XM_026939768.2 | mRNA | upstream | 377939 | 22620574 ~ 22644685 (-) | True | epn1 |
| XR_004578404.1 | other | downstream | 958995 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 2410653 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 2487453 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| trnaq-uug | other | downstream | 2488396 | 19745869 ~ 19745940 (-) | False | trnaq-uug |
| XR_004578458.1 | other | downstream | 2531176 | 19702611 ~ 19703160 (-) | True | LOC117597712 |
| TU15196 | other | upstream | 658716 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | upstream | 658716 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| TU16308 | other | upstream | 1993657 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 2148895 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 2293225 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
