Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940066.2 |
| length | 1430 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | tpi1b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 22925553 ~ 22931345 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006094 | gluconeogenesis | biological_process |
| GO:0006096 | glycolytic process | biological_process |
| GO:0006098 | pentose-phosphate shunt | biological_process |
| GO:0004807 | triose-phosphate isomerase activity | molecular_function |
| id | description |
|---|---|
| K01803 | TPI, tpiA; triosephosphate isomerase (TIM) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU15191 | lncRNA | downstream | 56142 | 22869159 ~ 22869411 (-) | True | G12808 |
| TU15188 | lncRNA | downstream | 61535 | 22863485 ~ 22864018 (-) | True | G12805 |
| TU15180 | lncRNA | downstream | 95682 | 22825000 ~ 22829871 (-) | True | G12797 |
| TU15019 | lncRNA | downstream | 168939 | 22754738 ~ 22756614 (-) | True | G12657 |
| TU15018 | lncRNA | downstream | 171612 | 22749613 ~ 22753941 (-) | True | G12656 |
| TU15203 | lncRNA | upstream | 6881 | 22938226 ~ 22938796 (-) | True | G12819 |
| TU15307 | lncRNA | upstream | 189265 | 23120610 ~ 23121495 (-) | False | LOC113542417 |
| TU15311 | lncRNA | upstream | 199930 | 23131275 ~ 23131498 (-) | True | G12917 |
| TU15401 | lncRNA | upstream | 201581 | 23132926 ~ 23165584 (-) | True | cxcr3.2 |
| TU15865 | lncRNA | upstream | 545974 | 23477319 ~ 23499991 (-) | False | cicb |
| XM_026940272.2 | mRNA | downstream | 17413 | 22902234 ~ 22908140 (-) | False | zgc:92606 |
| XM_026940149.2 | mRNA | downstream | 32926 | 22887194 ~ 22892627 (-) | True | LOC113542547 |
| XM_026940145.2 | mRNA | downstream | 39934 | 22875687 ~ 22885619 (-) | True | LOC113542545 |
| XM_026940144.2 | mRNA | downstream | 39939 | 22875687 ~ 22885614 (-) | False | LOC113542545 |
| XM_034304188.1 | mRNA | downstream | 53438 | 22860265 ~ 22872115 (-) | True | LOC113542546 |
| XM_026940258.2 | mRNA | upstream | 74166 | 23005511 ~ 23010223 (-) | True | gnb3a |
| XM_026939752.2 | mRNA | upstream | 83510 | 23014855 ~ 23025868 (-) | True | p3h3 |
| XM_026939954.2 | mRNA | upstream | 189127 | 23120472 ~ 23129313 (-) | False | LOC113542417 |
| XM_026939953.2 | mRNA | upstream | 189127 | 23120472 ~ 23128683 (-) | True | LOC113542417 |
| XM_026940083.2 | mRNA | upstream | 202622 | 23133967 ~ 23138518 (-) | False | cxcr3.2 |
| TU15196 | other | downstream | 17451 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU15197 | other | downstream | 17451 | 22901351 ~ 22908102 (-) | True | zgc:92606 |
| XR_004578404.1 | other | downstream | 1650212 | 21263577 ~ 21275341 (-) | False | rxrbb |
| TU12869 | other | downstream | 3101870 | 19816477 ~ 19823683 (-) | True | G10832 |
| trnaq-cug_9 | other | downstream | 3178670 | 19746812 ~ 19746883 (-) | False | trnaq-cug_9 |
| TU16308 | other | upstream | 1304947 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| XR_004578322.1 | other | upstream | 1460185 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16407 | other | upstream | 1604515 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| TU16925 | other | upstream | 2469411 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 2469411 | 25400756 ~ 25404306 (-) | False | G14258 |
