Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940260.2 |
| length | 745 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | lenep |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 24582501 ~ 24583824 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16411 | lncRNA | downstream | 4254 | 24573099 ~ 24578247 (-) | False | pbxip1b |
| TU16416 | lncRNA | downstream | 26889 | 24552427 ~ 24555612 (-) | False | LOC113542209 |
| TU16377 | lncRNA | downstream | 191097 | 24390511 ~ 24391404 (-) | True | G13783 |
| TU16376 | lncRNA | downstream | 194498 | 24387289 ~ 24388003 (-) | True | G13782 |
| TU16340 | lncRNA | downstream | 264081 | 24317682 ~ 24318420 (-) | True | G13748 |
| TU16422 | lncRNA | upstream | 30429 | 24614253 ~ 24619949 (-) | True | G13819 |
| TU16439 | lncRNA | upstream | 130165 | 24713989 ~ 24718852 (-) | True | G13834 |
| TU16983 | lncRNA | upstream | 479644 | 25063468 ~ 25065486 (-) | True | G14303 |
| TU16984 | lncRNA | upstream | 479644 | 25063468 ~ 25065486 (-) | False | G14303 |
| TU16985 | lncRNA | upstream | 479644 | 25063468 ~ 25065486 (-) | False | G14303 |
| XM_034302572.1 | mRNA | downstream | 9013 | 24561500 ~ 24573488 (-) | False | pbxip1b |
| XM_034302574.1 | mRNA | downstream | 9013 | 24561500 ~ 24573488 (-) | False | pbxip1b |
| XM_034302563.1 | mRNA | downstream | 9013 | 24561500 ~ 24573488 (-) | True | pbxip1b |
| XM_026939568.2 | mRNA | downstream | 21126 | 24552298 ~ 24561375 (-) | True | LOC113542209 |
| XM_026939727.2 | mRNA | downstream | 32013 | 24547264 ~ 24550488 (-) | True | LOC113542308 |
| XM_026939920.2 | mRNA | upstream | 1129 | 24584953 ~ 24622217 (-) | False | shc1 |
| XM_026939919.2 | mRNA | upstream | 1129 | 24584953 ~ 24622217 (-) | False | shc1 |
| XM_026939921.2 | mRNA | upstream | 1129 | 24584953 ~ 24598441 (-) | False | shc1 |
| XM_026939918.2 | mRNA | upstream | 1129 | 24584953 ~ 24598232 (-) | True | shc1 |
| XM_026944847.2 | mRNA | upstream | 186452 | 24770276 ~ 24807929 (-) | False | si:dkey-246i14.3 |
| TU16407 | other | downstream | 35664 | 24535860 ~ 24546837 (-) | True | si:ch211-105c13.3 |
| XR_004578322.1 | other | downstream | 181746 | 24391530 ~ 24400755 (-) | False | si:dkey-92i15.4 |
| TU16308 | other | downstream | 342422 | 24236292 ~ 24240079 (-) | True | LOC117596842 |
| TU15196 | other | downstream | 1674399 | 22901351 ~ 22908102 (-) | False | zgc:92606 |
| TU16925 | other | upstream | 816932 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16933 | other | upstream | 816932 | 25400756 ~ 25404306 (-) | False | G14258 |
| TU16922 | other | upstream | 818121 | 25401945 ~ 25404306 (-) | False | G14258 |
| XR_004578410.1 | other | upstream | 963210 | 25547034 ~ 25589703 (-) | False | cadm4 |
| XR_004578411.1 | other | upstream | 963233 | 25547057 ~ 25589703 (-) | False | cadm4 |
