Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944719.2 |
| length | 5883 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 17 |
| gene id | nrp1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 25772592 ~ 25840943 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0035767 | endothelial cell chemotaxis | biological_process |
| GO:0030947 | regulation of vascular endothelial growth factor receptor signaling pathway | biological_process |
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0007508 | larval heart development | biological_process |
| GO:0001755 | neural crest cell migration | biological_process |
| GO:0045765 | regulation of angiogenesis | biological_process |
| GO:0038084 | vascular endothelial growth factor signaling pathway | biological_process |
| GO:0048538 | thymus development | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0001570 | vasculogenesis | biological_process |
| GO:0008045 | motor neuron axon guidance | biological_process |
| GO:0048675 | axon extension | biological_process |
| GO:0007413 | axonal fasciculation | biological_process |
| GO:0007155 | cell adhesion | biological_process |
| GO:0071526 | semaphorin-plexin signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0019838 | growth factor binding | molecular_function |
| GO:0008201 | heparin binding | molecular_function |
| GO:0017154 | semaphorin receptor activity | molecular_function |
| GO:0005021 | vascular endothelial growth factor-activated receptor activity | molecular_function |
| id | description |
|---|---|
| K06724 | NRP1, CD304; neuropilin 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17272 | lncRNA | downstream | 8828 | 25758074 ~ 25763764 (-) | True | fxyd7 |
| TU17270 | lncRNA | downstream | 9097 | 25758074 ~ 25763495 (-) | False | fxyd7 |
| TU17271 | lncRNA | downstream | 9097 | 25758074 ~ 25763495 (-) | False | fxyd7 |
| TU17220 | lncRNA | downstream | 75757 | 25636104 ~ 25696835 (-) | True | G14464 |
| TU17202 | lncRNA | downstream | 215822 | 25551138 ~ 25556770 (-) | False | cadm4 |
| TU17264 | lncRNA | upstream | 179 | 25841122 ~ 25841958 (-) | True | G14506 |
| TU17816 | lncRNA | upstream | 263724 | 26104667 ~ 26109833 (-) | True | G15012 |
| TU17916 | lncRNA | upstream | 469080 | 26310023 ~ 26314327 (-) | True | G15111 |
| TU17971 | lncRNA | upstream | 562580 | 26403523 ~ 26407129 (-) | True | G15163 |
| TU17986 | lncRNA | upstream | 605709 | 26446652 ~ 26446940 (-) | True | G15174 |
| XM_034309064.1 | mRNA | downstream | 7898 | 25758055 ~ 25764694 (-) | False | fxyd7 |
| XM_026944866.2 | mRNA | downstream | 8891 | 25758055 ~ 25763701 (-) | False | fxyd7 |
| XM_026944864.2 | mRNA | downstream | 9031 | 25758055 ~ 25763561 (-) | False | fxyd7 |
| XM_026944831.2 | mRNA | downstream | 50348 | 25713466 ~ 25722244 (-) | True | si:ch211-79k12.1 |
| XM_026944806.2 | mRNA | downstream | 67077 | 25551130 ~ 25705515 (-) | False | cadm4 |
| XM_034309095.1 | mRNA | upstream | 197097 | 26038040 ~ 26419039 (-) | False | pard3aa |
| XM_026944877.2 | mRNA | upstream | 197097 | 26038040 ~ 26419039 (-) | False | pard3aa |
| XM_026944879.2 | mRNA | upstream | 197097 | 26038040 ~ 26419039 (-) | False | pard3aa |
| XM_026944876.2 | mRNA | upstream | 197097 | 26038040 ~ 26419039 (-) | True | pard3aa |
| XM_026944880.2 | mRNA | upstream | 270808 | 26111751 ~ 26419039 (-) | False | pard3aa |
| XR_004578410.1 | other | downstream | 182889 | 25547034 ~ 25589703 (-) | False | cadm4 |
| XR_004578411.1 | other | downstream | 182889 | 25547057 ~ 25589703 (-) | False | cadm4 |
| TU16925 | other | downstream | 368286 | 25400756 ~ 25404306 (-) | False | G14258 |
| XR_004578761.1 | other | upstream | 625868 | 26466811 ~ 26512297 (-) | False | LOC113545420 |
| trnar-ccu | other | upstream | 2404399 | 28245342 ~ 28245414 (-) | True | trnar-ccu |
| trnam-cau | other | upstream | 2404947 | 28245890 ~ 28245961 (-) | True | trnam-cau |
| trnar-ccu_1 | other | upstream | 2410113 | 28251056 ~ 28251128 (-) | True | trnar-ccu_1 |
| trnar-ccu_2 | other | upstream | 2414552 | 28255495 ~ 28255567 (-) | True | trnar-ccu_2 |
