Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnaf-gaa |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.53 |
| exon number | 1 |
| gene id | trnaf-gaa |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 29989218 ~ 29989290 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19515 | lncRNA | downstream | 35933 | 29873607 ~ 29953285 (-) | True | G16566 |
| TU19531 | lncRNA | downstream | 81794 | 29904478 ~ 29907424 (-) | True | G16582 |
| TU19490 | lncRNA | downstream | 190247 | 29797753 ~ 29798971 (-) | False | pcolce2b |
| TU19299 | lncRNA | downstream | 385021 | 29548210 ~ 29604197 (-) | False | dipk2ab |
| TU19203 | lncRNA | downstream | 777162 | 29209407 ~ 29212056 (-) | True | G16291 |
| TU19591 | lncRNA | upstream | 160052 | 30149342 ~ 30149588 (-) | True | G16629 |
| TU19674 | lncRNA | upstream | 185734 | 30175024 ~ 30175364 (-) | True | G16709 |
| TU19688 | lncRNA | upstream | 260174 | 30249464 ~ 30249677 (-) | True | G16721 |
| TU19714 | lncRNA | upstream | 342107 | 30331397 ~ 30331613 (-) | True | G16747 |
| TU19682 | lncRNA | upstream | 343284 | 30332574 ~ 30333173 (-) | False | gpr158a |
| XM_034309177.1 | mRNA | downstream | 64008 | 29918872 ~ 29925210 (-) | True | pdss1 |
| XM_026944704.2 | mRNA | downstream | 64009 | 29919469 ~ 29925209 (-) | False | pdss1 |
| XM_034305812.1 | mRNA | downstream | 137019 | 29834929 ~ 29852199 (-) | True | acbd5a |
| XM_034305813.1 | mRNA | downstream | 137635 | 29834929 ~ 29851583 (-) | False | acbd5a |
| XM_026944795.2 | mRNA | downstream | 137635 | 29834929 ~ 29851583 (-) | False | acbd5a |
| XM_026944833.2 | mRNA | upstream | 37133 | 30026423 ~ 30060595 (-) | True | gad2 |
| XM_034304616.1 | mRNA | upstream | 78233 | 30067523 ~ 30111302 (-) | True | myo3a |
| XM_034303621.1 | mRNA | upstream | 126015 | 30115305 ~ 30163697 (-) | True | LOC117597071 |
| XM_034303618.1 | mRNA | upstream | 200265 | 30189555 ~ 30190190 (-) | True | LOC117597070 |
| XM_026944840.2 | mRNA | upstream | 203761 | 30193051 ~ 30208074 (-) | True | anxa13 |
| trnar-ccu_3 | other | downstream | 1732901 | 28256245 ~ 28256317 (-) | True | trnar-ccu_3 |
| trnar-ccu_2 | other | downstream | 1733651 | 28255495 ~ 28255567 (-) | True | trnar-ccu_2 |
| trnar-ccu_1 | other | downstream | 1738090 | 28251056 ~ 28251128 (-) | True | trnar-ccu_1 |
| trnam-cau | other | downstream | 1743257 | 28245890 ~ 28245961 (-) | True | trnam-cau |
| trnar-ccu | other | downstream | 1743804 | 28245342 ~ 28245414 (-) | True | trnar-ccu |
| trnah-gug | other | upstream | 643776 | 30633066 ~ 30633137 (-) | True | trnah-gug |
| TU19913 | other | upstream | 651408 | 30640698 ~ 30642974 (-) | True | G16900 |
| LOC117595698 | other | upstream | 796673 | 30785963 ~ 30789410 (-) | True | LOC117595698 |
| TU20271 | other | upstream | 1003779 | 30993069 ~ 30997169 (-) | False | telo2 |
| TU20272 | other | upstream | 1003779 | 30993069 ~ 30996234 (-) | False | telo2 |
