Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnar-ccu_3 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.60 |
| exon number | 1 |
| gene id | trnar-ccu_3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 28256245 ~ 28256317 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18723 | lncRNA | downstream | 49645 | 28206157 ~ 28206600 (-) | True | G15852 |
| TU18720 | lncRNA | downstream | 79399 | 28175684 ~ 28176846 (-) | True | G15849 |
| TU18707 | lncRNA | downstream | 169427 | 28085261 ~ 28086818 (-) | True | G15842 |
| TU18705 | lncRNA | downstream | 205199 | 28050808 ~ 28051046 (-) | True | G15840 |
| TU18468 | lncRNA | downstream | 805758 | 27449797 ~ 27450487 (-) | False | sugct |
| XR_004579059.1 | lncRNA | upstream | 160799 | 28417116 ~ 28434542 (-) | True | LOC117598396 |
| TU18806 | lncRNA | upstream | 180514 | 28436831 ~ 28453100 (-) | True | LOC113545501 |
| XR_003404618.2 | lncRNA | upstream | 181544 | 28437861 ~ 28453100 (-) | False | LOC113545501 |
| TU19130 | lncRNA | upstream | 765320 | 29021637 ~ 29021844 (-) | True | G16228 |
| TU19203 | lncRNA | upstream | 953090 | 29209407 ~ 29212056 (-) | True | G16291 |
| XM_034308781.1 | mRNA | downstream | 55170 | 28160677 ~ 28201075 (-) | True | pfkpa |
| XM_034303139.1 | mRNA | upstream | 344721 | 28601038 ~ 28638002 (-) | False | wdr37 |
| XM_034303135.1 | mRNA | upstream | 344721 | 28601038 ~ 28638001 (-) | False | wdr37 |
| XM_034303137.1 | mRNA | upstream | 344721 | 28601038 ~ 28636392 (-) | False | wdr37 |
| XM_034303134.1 | mRNA | upstream | 344721 | 28601038 ~ 28636392 (-) | True | wdr37 |
| XM_026944773.2 | mRNA | upstream | 535545 | 28791862 ~ 28803226 (-) | True | bdh1 |
| trnar-ccu_2 | other | downstream | 678 | 28255495 ~ 28255567 (-) | True | trnar-ccu_2 |
| trnar-ccu_1 | other | downstream | 5117 | 28251056 ~ 28251128 (-) | True | trnar-ccu_1 |
| trnam-cau | other | downstream | 10284 | 28245890 ~ 28245961 (-) | True | trnam-cau |
| trnar-ccu | other | downstream | 10831 | 28245342 ~ 28245414 (-) | True | trnar-ccu |
| XR_004578761.1 | other | downstream | 1743948 | 26466811 ~ 26512297 (-) | False | LOC113545420 |
| trnaf-gaa | other | upstream | 1732901 | 29989218 ~ 29989290 (-) | True | trnaf-gaa |
| trnah-gug | other | upstream | 2376749 | 30633066 ~ 30633137 (-) | True | trnah-gug |
| TU19913 | other | upstream | 2384381 | 30640698 ~ 30642974 (-) | True | G16900 |
| LOC117595698 | other | upstream | 2529646 | 30785963 ~ 30789410 (-) | True | LOC117595698 |
| TU20271 | other | upstream | 2736752 | 30993069 ~ 30997169 (-) | False | telo2 |
