Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU452787 |
| length | 573 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G381893 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 6223168 ~ 6242697 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU452719 | lncRNA | upstream | 35182 | 6117000 ~ 6187986 (+) | True | G381833 |
| TU452725 | lncRNA | upstream | 39695 | 6136273 ~ 6183473 (+) | True | G381836 |
| TU452715 | lncRNA | upstream | 88143 | 6124195 ~ 6135025 (+) | True | G381832 |
| TU452718 | lncRNA | upstream | 104943 | 6117000 ~ 6118225 (+) | False | G381833 |
| TU452726 | lncRNA | upstream | 107307 | 6115546 ~ 6115861 (+) | True | G381837 |
| TU452766 | lncRNA | downstream | 33010 | 6275707 ~ 6280046 (+) | True | G381875 |
| TU453091 | lncRNA | downstream | 209666 | 6452363 ~ 6452575 (+) | True | G382122 |
| TU453109 | lncRNA | downstream | 259318 | 6502015 ~ 6513170 (+) | True | G382138 |
| TU453117 | lncRNA | downstream | 294334 | 6537031 ~ 6537231 (+) | True | G382146 |
| TU453119 | lncRNA | downstream | 307105 | 6549802 ~ 6550804 (+) | True | G382148 |
| XM_026922138.2 | mRNA | upstream | 109719 | 6063809 ~ 6113449 (+) | True | LOC113531397 |
| XM_026922121.2 | mRNA | upstream | 170812 | 6014295 ~ 6052356 (+) | False | zmp:0000001168 |
| XM_026922401.2 | mRNA | downstream | 100617 | 6343314 ~ 6370416 (+) | True | pigl |
| XM_026922479.2 | mRNA | downstream | 137965 | 6380662 ~ 6383685 (+) | True | ubb |
| XM_026922493.2 | mRNA | downstream | 146280 | 6388977 ~ 6405621 (+) | True | p2rx5 |
| XM_026922288.2 | mRNA | downstream | 165327 | 6408024 ~ 6414180 (+) | True | shpk |
| XM_026922287.2 | mRNA | downstream | 172706 | 6415403 ~ 6432002 (+) | True | LOC113531512 |
| TU452724 | other | upstream | 42255 | 6177804 ~ 6180913 (+) | True | G381835 |
| XR_004577455.1 | other | upstream | 171271 | 5990022 ~ 6051897 (+) | False | zmp:0000001168 |
| XR_003403255.2 | other | upstream | 171271 | 5990023 ~ 6051897 (+) | False | zmp:0000001168 |
| TU452712 | other | upstream | 246243 | 5975369 ~ 5976925 (+) | True | G381829 |
| TU452709 | other | upstream | 246471 | 5975369 ~ 5976697 (+) | False | G381829 |
| TU452818 | other | downstream | 137998 | 6380695 ~ 6383660 (+) | False | ubb |
| XR_004577432.1 | other | downstream | 719513 | 6962210 ~ 7058199 (+) | False | LOC113531592 |
| XR_003403276.1 | other | downstream | 1034148 | 7276845 ~ 7276973 (+) | True | LOC113531674 |
| XR_003403275.1 | other | downstream | 1034902 | 7277599 ~ 7277727 (+) | True | LOC113531673 |
| TU454294 | other | downstream | 1899914 | 8142611 ~ 8144880 (+) | False | spns3 |
