Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU453119 |
| length | 881 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G382148 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 6549802 ~ 6550804 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU453117 | lncRNA | upstream | 12571 | 6537031 ~ 6537231 (+) | True | G382146 |
| TU453109 | lncRNA | upstream | 36632 | 6502015 ~ 6513170 (+) | True | G382138 |
| TU453091 | lncRNA | upstream | 97227 | 6452363 ~ 6452575 (+) | True | G382122 |
| TU452766 | lncRNA | upstream | 269756 | 6275707 ~ 6280046 (+) | True | G381875 |
| TU452790 | lncRNA | upstream | 298729 | 6226565 ~ 6251073 (+) | True | G381895 |
| TU453180 | lncRNA | downstream | 25175 | 6575979 ~ 6576182 (+) | True | G382205 |
| TU453190 | lncRNA | downstream | 28309 | 6579113 ~ 6580610 (+) | True | G382207 |
| TU453261 | lncRNA | downstream | 115835 | 6666639 ~ 6668385 (+) | True | G382257 |
| TU453282 | lncRNA | downstream | 256375 | 6807179 ~ 6809541 (+) | True | G382274 |
| TU453300 | lncRNA | downstream | 259549 | 6810353 ~ 6810567 (+) | True | G382292 |
| XM_034300454.1 | mRNA | upstream | 4067 | 6537778 ~ 6545735 (+) | True | tbx16l |
| XM_026921474.2 | mRNA | upstream | 16908 | 6522164 ~ 6532894 (+) | True | eral1 |
| XM_034300947.1 | mRNA | upstream | 98369 | 6436800 ~ 6451433 (+) | True | LOC113531597 |
| XM_026922287.2 | mRNA | upstream | 117800 | 6415403 ~ 6432002 (+) | True | LOC113531512 |
| XM_026922288.2 | mRNA | upstream | 135622 | 6408024 ~ 6414180 (+) | True | shpk |
| XM_026921928.2 | mRNA | downstream | 83166 | 6633970 ~ 6653902 (+) | True | LOC113531298 |
| XM_026921929.2 | mRNA | downstream | 107249 | 6658053 ~ 6662250 (+) | True | c1qbp |
| XM_026921478.2 | mRNA | downstream | 118128 | 6668932 ~ 6687976 (+) | True | LOC113531024 |
| XM_026922170.2 | mRNA | downstream | 140232 | 6691036 ~ 6773907 (+) | True | srrm3 |
| XM_026921457.2 | mRNA | downstream | 227188 | 6777992 ~ 6784388 (+) | True | hspb1 |
| TU452818 | other | upstream | 166142 | 6380695 ~ 6383660 (+) | False | ubb |
| TU452787 | other | upstream | 307105 | 6223168 ~ 6242697 (+) | True | G381893 |
| TU452724 | other | upstream | 368889 | 6177804 ~ 6180913 (+) | True | G381835 |
| XR_004577455.1 | other | upstream | 497905 | 5990022 ~ 6051897 (+) | False | zmp:0000001168 |
| XR_004577432.1 | other | downstream | 411406 | 6962210 ~ 7058199 (+) | False | LOC113531592 |
| XR_003403276.1 | other | downstream | 726041 | 7276845 ~ 7276973 (+) | True | LOC113531674 |
| XR_003403275.1 | other | downstream | 726795 | 7277599 ~ 7277727 (+) | True | LOC113531673 |
| TU454294 | other | downstream | 1591807 | 8142611 ~ 8144880 (+) | False | spns3 |
| TU454332 | other | downstream | 1631587 | 8182391 ~ 8213107 (+) | True | G383217 |
