Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU453699 |
| length | 558 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G382667 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 7448911 ~ 7450445 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU453677 | lncRNA | upstream | 60675 | 7386510 ~ 7388236 (+) | True | G382646 |
| TU453653 | lncRNA | upstream | 187821 | 7260253 ~ 7261090 (+) | True | LOC113531088 |
| XR_004577398.1 | lncRNA | upstream | 291682 | 7154594 ~ 7157229 (+) | True | LOC117596228 |
| XR_004577397.1 | lncRNA | upstream | 291682 | 7154594 ~ 7157229 (+) | False | LOC117596228 |
| TU453632 | lncRNA | upstream | 339202 | 7108726 ~ 7109709 (+) | True | G382606 |
| TU453724 | lncRNA | downstream | 47321 | 7497766 ~ 7500585 (+) | True | G382686 |
| TU453732 | lncRNA | downstream | 87969 | 7538414 ~ 7544086 (+) | False | dpm2 |
| TU454007 | lncRNA | downstream | 195691 | 7646136 ~ 7646471 (+) | True | G382929 |
| TU454009 | lncRNA | downstream | 198864 | 7649309 ~ 7649523 (+) | True | G382931 |
| TU454010 | lncRNA | downstream | 199176 | 7649621 ~ 7650073 (+) | True | G382932 |
| XM_026921495.2 | mRNA | upstream | 14891 | 7412105 ~ 7434020 (+) | False | pkn3 |
| XM_026921497.2 | mRNA | upstream | 14891 | 7418272 ~ 7434020 (+) | True | pkn3 |
| XM_026921954.2 | mRNA | upstream | 65527 | 7295229 ~ 7383384 (+) | True | cita |
| XM_026921957.2 | mRNA | upstream | 65527 | 7295229 ~ 7383384 (+) | False | cita |
| XM_026921956.2 | mRNA | upstream | 65527 | 7295229 ~ 7383384 (+) | False | cita |
| XM_026921584.2 | mRNA | downstream | 37371 | 7487816 ~ 7536970 (+) | True | fam102ab |
| XM_026921585.2 | mRNA | downstream | 37382 | 7487827 ~ 7536970 (+) | False | fam102ab |
| XM_026921586.2 | mRNA | downstream | 38200 | 7488645 ~ 7536970 (+) | False | fam102ab |
| XM_026922257.2 | mRNA | downstream | 87913 | 7538358 ~ 7544114 (+) | True | dpm2 |
| XM_026921559.2 | mRNA | downstream | 96015 | 7546460 ~ 7563680 (+) | False | pip5kl1 |
| XR_003403275.1 | other | upstream | 171184 | 7277599 ~ 7277727 (+) | True | LOC113531673 |
| XR_003403276.1 | other | upstream | 171938 | 7276845 ~ 7276973 (+) | True | LOC113531674 |
| XR_004577432.1 | other | upstream | 390712 | 6962210 ~ 7058199 (+) | False | LOC113531592 |
| TU452818 | other | upstream | 1065251 | 6380695 ~ 6383660 (+) | False | ubb |
| TU452787 | other | upstream | 1206214 | 6223168 ~ 6242697 (+) | True | G381893 |
| TU454294 | other | downstream | 692166 | 8142611 ~ 8144880 (+) | False | spns3 |
| TU454332 | other | downstream | 731946 | 8182391 ~ 8213107 (+) | True | G383217 |
| TU454617 | other | downstream | 1139922 | 8590367 ~ 8591155 (+) | False | gig2o |
| TU454806 | other | downstream | 1314457 | 8764902 ~ 8775134 (+) | True | G383625 |
| XR_003403287.2 | other | downstream | 1918044 | 9368489 ~ 9368564 (+) | True | LOC113531685 |
