Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU454332 |
| length | 1032 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G383217 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 8182391 ~ 8213107 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU454293 | lncRNA | upstream | 18691 | 8162100 ~ 8163700 (+) | True | G383181 |
| TU454323 | lncRNA | upstream | 56643 | 8124643 ~ 8125748 (+) | True | G383208 |
| TU454245 | lncRNA | upstream | 74919 | 8022993 ~ 8107472 (+) | True | G383143 |
| TU454229 | lncRNA | upstream | 196023 | 7985612 ~ 7986368 (+) | True | G383128 |
| TU454164 | lncRNA | upstream | 273165 | 7905334 ~ 7909226 (+) | True | G383067 |
| TU454318 | lncRNA | downstream | 119350 | 8332457 ~ 8336304 (+) | True | G383205 |
| TU454373 | lncRNA | downstream | 139370 | 8352477 ~ 8355690 (+) | True | G383256 |
| TU454533 | lncRNA | downstream | 171138 | 8384245 ~ 8384503 (+) | True | G383399 |
| TU454593 | lncRNA | downstream | 294109 | 8507216 ~ 8508382 (+) | True | G383443 |
| TU454598 | lncRNA | downstream | 341489 | 8554596 ~ 8556843 (+) | True | G383448 |
| XM_026921471.2 | mRNA | upstream | 21134 | 8142583 ~ 8161257 (+) | True | spns3 |
| XM_026921472.2 | mRNA | upstream | 21134 | 8142586 ~ 8161257 (+) | False | spns3 |
| XM_026922291.2 | mRNA | upstream | 78286 | 8099847 ~ 8104105 (+) | True | LOC113531515 |
| XM_026921527.2 | mRNA | upstream | 385040 | 7770898 ~ 7797351 (+) | True | p2rx1 |
| XM_026921529.2 | mRNA | upstream | 385040 | 7770898 ~ 7797351 (+) | False | p2rx1 |
| XM_026922067.2 | mRNA | downstream | 106830 | 8319937 ~ 8325759 (+) | True | ftr82 |
| XM_034300765.1 | mRNA | downstream | 106830 | 8319937 ~ 8325759 (+) | False | ftr82 |
| XM_026922083.2 | mRNA | downstream | 115069 | 8328176 ~ 8332329 (+) | True | ift22 |
| XM_026922064.2 | mRNA | downstream | 206707 | 8419814 ~ 8465196 (+) | True | c2cd2l |
| XM_026922085.2 | mRNA | downstream | 253239 | 8466346 ~ 8467007 (+) | True | LOC113531377 |
| TU454294 | other | upstream | 37511 | 8142611 ~ 8144880 (+) | False | spns3 |
| XR_003403275.1 | other | upstream | 904664 | 7277599 ~ 7277727 (+) | True | LOC113531673 |
| XR_003403276.1 | other | upstream | 905418 | 7276845 ~ 7276973 (+) | True | LOC113531674 |
| XR_004577432.1 | other | upstream | 1124192 | 6962210 ~ 7058199 (+) | False | LOC113531592 |
| TU452818 | other | upstream | 1798731 | 6380695 ~ 6383660 (+) | False | ubb |
| TU454617 | other | downstream | 377260 | 8590367 ~ 8591155 (+) | False | gig2o |
| TU454806 | other | downstream | 551795 | 8764902 ~ 8775134 (+) | True | G383625 |
| XR_003403287.2 | other | downstream | 1155382 | 9368489 ~ 9368564 (+) | True | LOC113531685 |
| XR_003403288.1 | other | downstream | 1155724 | 9368831 ~ 9368903 (+) | True | LOC113531686 |
| XR_003403289.1 | other | downstream | 1156154 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
