Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU454617 |
| length | 683 |
| RNA type | TUCP |
| GC content | 0.58 |
| exon number | 2 |
| gene id | gig2o |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 8590310 ~ 8592381 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU454599 | lncRNA | upstream | 25110 | 8563592 ~ 8565257 (+) | False | atf5a |
| TU454598 | lncRNA | upstream | 33524 | 8554596 ~ 8556843 (+) | True | G383448 |
| TU454593 | lncRNA | upstream | 81985 | 8507216 ~ 8508382 (+) | True | G383443 |
| TU454533 | lncRNA | upstream | 205864 | 8384245 ~ 8384503 (+) | True | G383399 |
| TU454373 | lncRNA | upstream | 234677 | 8352477 ~ 8355690 (+) | True | G383256 |
| XR_004577387.1 | lncRNA | downstream | 23148 | 8614303 ~ 8615355 (+) | True | LOC117596219 |
| TU454787 | lncRNA | downstream | 146718 | 8737873 ~ 8738074 (+) | True | G383609 |
| XR_003403243.2 | lncRNA | downstream | 359637 | 8950792 ~ 8953176 (+) | True | LOC113531289 |
| XR_003403240.2 | lncRNA | downstream | 362992 | 8954147 ~ 8964092 (+) | False | LOC113531287 |
| TU454867 | lncRNA | downstream | 363016 | 8954171 ~ 8964359 (+) | True | LOC113531287 |
| XM_026922071.2 | mRNA | upstream | 25683 | 8558826 ~ 8564684 (+) | True | atf5a |
| XM_026922054.2 | mRNA | upstream | 39833 | 8495718 ~ 8550534 (+) | True | phldb1a |
| XM_026922072.2 | mRNA | upstream | 96017 | 8481772 ~ 8494350 (+) | True | arcn1a |
| XM_026922085.2 | mRNA | upstream | 123360 | 8466346 ~ 8467007 (+) | True | LOC113531377 |
| XM_026922064.2 | mRNA | upstream | 125171 | 8419814 ~ 8465196 (+) | True | c2cd2l |
| XM_026921836.2 | mRNA | downstream | 187119 | 8778274 ~ 8793835 (+) | True | adamts8a |
| XM_026921839.2 | mRNA | downstream | 202929 | 8794084 ~ 8807241 (+) | False | zbtb44 |
| XM_026921837.2 | mRNA | downstream | 202932 | 8794087 ~ 8808883 (+) | True | zbtb44 |
| XM_026921838.2 | mRNA | downstream | 202934 | 8794089 ~ 8808883 (+) | False | zbtb44 |
| XM_026922308.2 | mRNA | downstream | 250342 | 8841497 ~ 8866506 (+) | True | LOC113531529 |
| TU454332 | other | upstream | 377260 | 8182391 ~ 8213107 (+) | True | G383217 |
| TU454294 | other | upstream | 445487 | 8142611 ~ 8144880 (+) | False | spns3 |
| XR_003403275.1 | other | upstream | 1312640 | 7277599 ~ 7277727 (+) | True | LOC113531673 |
| XR_003403276.1 | other | upstream | 1313394 | 7276845 ~ 7276973 (+) | True | LOC113531674 |
| XR_004577432.1 | other | upstream | 1532168 | 6962210 ~ 7058199 (+) | False | LOC113531592 |
| TU454806 | other | downstream | 173747 | 8764902 ~ 8775134 (+) | True | G383625 |
| XR_003403287.2 | other | downstream | 777334 | 9368489 ~ 9368564 (+) | True | LOC113531685 |
| XR_003403288.1 | other | downstream | 777676 | 9368831 ~ 9368903 (+) | True | LOC113531686 |
| XR_003403289.1 | other | downstream | 778106 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403274.1 | other | downstream | 779905 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
