Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU455393 |
| length | 206 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G384106 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 9486462 ~ 9486667 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0004806 | triglyceride lipase activity | molecular_function |
| GO:0052689 | carboxylic ester hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577435.1 | lncRNA | upstream | 30210 | 9454045 ~ 9456252 (+) | True | LOC117596253 |
| TU455199 | lncRNA | upstream | 31873 | 9372166 ~ 9454589 (+) | True | G383971 |
| TU455193 | lncRNA | upstream | 143817 | 9342428 ~ 9342645 (+) | True | G383965 |
| TU455189 | lncRNA | upstream | 147316 | 9338933 ~ 9339146 (+) | True | G383961 |
| TU455186 | lncRNA | upstream | 148556 | 9337026 ~ 9337906 (+) | True | G383960 |
| TU455412 | lncRNA | downstream | 39644 | 9526311 ~ 9526518 (+) | True | G384125 |
| TU455422 | lncRNA | downstream | 74468 | 9561135 ~ 9561374 (+) | True | G384134 |
| TU455437 | lncRNA | downstream | 195646 | 9682313 ~ 9686604 (+) | True | G384144 |
| TU455438 | lncRNA | downstream | 195646 | 9682313 ~ 9686604 (+) | False | G384144 |
| TU455439 | lncRNA | downstream | 195646 | 9682313 ~ 9686604 (+) | False | G384144 |
| XM_026922215.2 | mRNA | upstream | 13171 | 9461617 ~ 9473291 (+) | True | kank1b |
| XM_026921902.2 | mRNA | upstream | 35175 | 9432528 ~ 9451287 (+) | True | prkaa1 |
| XM_034300609.1 | mRNA | upstream | 37850 | 9432568 ~ 9448612 (+) | False | prkaa1 |
| XM_034300528.1 | mRNA | upstream | 57237 | 9417458 ~ 9429225 (+) | True | LOC113531574 |
| XM_026922375.2 | mRNA | upstream | 72606 | 9402055 ~ 9413856 (+) | True | LOC113531568 |
| XM_026921492.2 | mRNA | downstream | 1172 | 9487839 ~ 9500989 (+) | False | LOC113531033 |
| XM_034300457.1 | mRNA | downstream | 1175 | 9487842 ~ 9500989 (+) | True | LOC113531033 |
| XM_034300877.1 | mRNA | downstream | 53894 | 9540561 ~ 9557895 (+) | True | glipr2 |
| XM_034300878.1 | mRNA | downstream | 69379 | 9556046 ~ 9557895 (+) | False | glipr2 |
| XM_026922139.2 | mRNA | downstream | 85290 | 9571957 ~ 9574670 (+) | True | zgc:55461 |
| XR_003403285.1 | other | upstream | 114932 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 115325 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| XR_003403289.1 | other | upstream | 117134 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403288.1 | other | upstream | 117559 | 9368831 ~ 9368903 (+) | True | LOC113531686 |
| XR_003403287.2 | other | upstream | 117898 | 9368489 ~ 9368564 (+) | True | LOC113531685 |
| TU455483 | other | downstream | 279073 | 9765740 ~ 9768036 (+) | True | G384178 |
| TU455978 | other | downstream | 891546 | 10378213 ~ 10379665 (+) | True | G384593 |
| XR_003403209.2 | other | downstream | 1811313 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU457909 | other | downstream | 4335121 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 4339183 | 13825850 ~ 13828148 (+) | True | G386325 |
