Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU455490 |
| length | 777 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G384183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 9794083 ~ 9794859 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU455489 | lncRNA | upstream | 2172 | 9791144 ~ 9791911 (+) | True | G384182 |
| TU455437 | lncRNA | upstream | 107479 | 9682313 ~ 9686604 (+) | True | G384144 |
| TU455438 | lncRNA | upstream | 107479 | 9682313 ~ 9686604 (+) | False | G384144 |
| TU455439 | lncRNA | upstream | 107479 | 9682313 ~ 9686604 (+) | False | G384144 |
| TU455422 | lncRNA | upstream | 232709 | 9561135 ~ 9561374 (+) | True | G384134 |
| TU455496 | lncRNA | downstream | 9723 | 9804582 ~ 9805004 (+) | True | G384189 |
| TU455504 | lncRNA | downstream | 18626 | 9813485 ~ 9813691 (+) | True | G384197 |
| TU455519 | lncRNA | downstream | 40845 | 9835704 ~ 9835912 (+) | True | G384212 |
| TU455790 | lncRNA | downstream | 327674 | 10122533 ~ 10122886 (+) | True | G384459 |
| TU455792 | lncRNA | downstream | 332912 | 10127771 ~ 10127971 (+) | True | G384461 |
| XM_026921891.2 | mRNA | upstream | 32245 | 9743409 ~ 9761838 (+) | False | ptpa |
| XM_026921893.2 | mRNA | upstream | 32245 | 9743409 ~ 9761838 (+) | False | ptpa |
| XM_026921894.2 | mRNA | upstream | 32245 | 9743456 ~ 9761838 (+) | False | ptpa |
| XM_034300599.1 | mRNA | upstream | 32245 | 9743758 ~ 9761838 (+) | True | ptpa |
| XM_034300524.1 | mRNA | upstream | 86968 | 9687802 ~ 9707115 (+) | False | lrsam1 |
| XM_026921569.2 | mRNA | downstream | 185441 | 9980300 ~ 9987624 (+) | True | ntmt1 |
| XM_026921570.2 | mRNA | downstream | 185452 | 9980311 ~ 9987628 (+) | False | ntmt1 |
| XM_026921571.2 | mRNA | downstream | 189178 | 9984037 ~ 9987628 (+) | False | ntmt1 |
| XM_026922347.2 | mRNA | downstream | 210137 | 10004996 ~ 10042974 (+) | True | gpr107 |
| XM_034300715.1 | mRNA | downstream | 258934 | 10053793 ~ 10092897 (+) | False | ncs1a |
| TU455483 | other | upstream | 26047 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_003403285.1 | other | upstream | 422553 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 422946 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| XR_003403289.1 | other | upstream | 424755 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403288.1 | other | upstream | 425180 | 9368831 ~ 9368903 (+) | True | LOC113531686 |
| TU455978 | other | downstream | 583354 | 10378213 ~ 10379665 (+) | True | G384593 |
| XR_003403209.2 | other | downstream | 1503121 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU457909 | other | downstream | 4026929 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 4030991 | 13825850 ~ 13828148 (+) | True | G386325 |
| XR_004577401.1 | other | downstream | 5566499 | 15361358 ~ 15367247 (+) | True | fkbp6 |
