Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU456400 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G384973 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 11116378 ~ 11116582 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU456323 | lncRNA | upstream | 18443 | 11096842 ~ 11097935 (+) | True | G384906 |
| TU456303 | lncRNA | upstream | 178977 | 10922884 ~ 10937401 (+) | True | G384887 |
| TU456279 | lncRNA | upstream | 331444 | 10784701 ~ 10784934 (+) | True | G384868 |
| TU456278 | lncRNA | upstream | 332579 | 10783404 ~ 10783799 (+) | True | G384867 |
| TU456269 | lncRNA | upstream | 425737 | 10690140 ~ 10690641 (+) | True | G384859 |
| XR_004577443.1 | lncRNA | downstream | 9801 | 11126383 ~ 11127885 (+) | True | LOC117596264 |
| XR_003403219.2 | lncRNA | downstream | 14294 | 11130876 ~ 11131867 (+) | True | LOC113531091 |
| TU456405 | lncRNA | downstream | 28161 | 11144743 ~ 11145027 (+) | True | G384977 |
| TU456419 | lncRNA | downstream | 168744 | 11285326 ~ 11285765 (+) | True | G384989 |
| TU456412 | lncRNA | downstream | 181392 | 11297974 ~ 11311011 (+) | False | ajm1 |
| XM_034300946.1 | mRNA | upstream | 20237 | 11025868 ~ 11096141 (+) | False | fer |
| XM_026922116.2 | mRNA | downstream | 102476 | 11219058 ~ 11274500 (+) | False | mapkap1 |
| XM_026922115.2 | mRNA | downstream | 103350 | 11219932 ~ 11276976 (+) | False | mapkap1 |
| XM_026922117.2 | mRNA | downstream | 120305 | 11236887 ~ 11276976 (+) | True | mapkap1 |
| XM_026921450.2 | mRNA | downstream | 181398 | 11297980 ~ 11326055 (+) | True | ajm1 |
| XM_026921453.2 | mRNA | downstream | 181398 | 11297980 ~ 11326055 (+) | False | ajm1 |
| TU455978 | other | upstream | 736713 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 1348342 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_003403285.1 | other | upstream | 1744848 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 1745241 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| XR_003403289.1 | other | upstream | 1747050 | 9369261 ~ 9369328 (+) | True | LOC113531687 |
| XR_003403209.2 | other | downstream | 181398 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU457909 | other | downstream | 2705206 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 2709268 | 13825850 ~ 13828148 (+) | True | G386325 |
| XR_004577401.1 | other | downstream | 4244776 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 4918241 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
