Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU457869 |
| length | 622 |
| lncRNA type | read_through |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G386265 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13687263 ~ 13779139 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU457843 | lncRNA | upstream | 29175 | 13655008 ~ 13658088 (+) | True | G386246 |
| TU457741 | lncRNA | upstream | 179258 | 13507398 ~ 13508005 (+) | True | G386147 |
| TU457730 | lncRNA | upstream | 209485 | 13477414 ~ 13477778 (+) | True | G386136 |
| TU457662 | lncRNA | upstream | 323675 | 13361565 ~ 13363588 (+) | True | LOC117596226 |
| XR_004577393.1 | lncRNA | upstream | 324955 | 13351048 ~ 13362308 (+) | False | LOC117596226 |
| TU457948 | lncRNA | downstream | 63204 | 13842343 ~ 13842646 (+) | True | G386330 |
| TU457960 | lncRNA | downstream | 75719 | 13854858 ~ 13855094 (+) | True | G386342 |
| TU457975 | lncRNA | downstream | 96799 | 13875938 ~ 13876193 (+) | True | G386348 |
| TU457977 | lncRNA | downstream | 111864 | 13891003 ~ 13892625 (+) | True | G386350 |
| XR_004577400.1 | lncRNA | downstream | 122845 | 13901984 ~ 13903993 (+) | True | LOC117596231 |
| XM_034300710.1 | mRNA | upstream | 55447 | 13523614 ~ 13631816 (+) | False | LOC113531575 |
| XM_034300709.1 | mRNA | upstream | 157589 | 13523017 ~ 13529674 (+) | False | LOC113531575 |
| XM_026922383.2 | mRNA | upstream | 157589 | 13523629 ~ 13529674 (+) | False | LOC113531575 |
| XM_034300708.1 | mRNA | upstream | 157589 | 13523799 ~ 13529674 (+) | False | LOC113531575 |
| XM_026922381.2 | mRNA | upstream | 157590 | 13523615 ~ 13529673 (+) | True | LOC113531575 |
| XM_026922443.2 | mRNA | downstream | 27748 | 13806887 ~ 13810554 (+) | True | pex12 |
| XM_026922444.2 | mRNA | downstream | 28368 | 13807507 ~ 13810554 (+) | False | pex12 |
| XM_034300462.1 | mRNA | downstream | 91512 | 13870651 ~ 13874909 (+) | False | ncf1 |
| XM_034300461.1 | mRNA | downstream | 91512 | 13870651 ~ 13874907 (+) | True | ncf1 |
| XM_026922387.2 | mRNA | downstream | 97696 | 13876835 ~ 13889267 (+) | True | rcc1l |
| XR_003403209.2 | other | upstream | 2376410 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 3307598 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 3919227 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_003403285.1 | other | upstream | 4315733 | 9371459 ~ 9371530 (+) | True | LOC113531683 |
| XR_003403274.1 | other | upstream | 4316126 | 9371060 ~ 9371137 (+) | True | LOC113531672 |
| TU457909 | other | downstream | 42649 | 13821788 ~ 13824055 (+) | True | G386294 |
| TU457943 | other | downstream | 46711 | 13825850 ~ 13828148 (+) | True | G386325 |
| XR_004577401.1 | other | downstream | 1582219 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 2255684 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 2369221 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
