Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU457960 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G386342 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13854858 ~ 13855094 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU457948 | lncRNA | upstream | 12212 | 13842343 ~ 13842646 (+) | True | G386330 |
| TU457869 | lncRNA | upstream | 75719 | 13687263 ~ 13779139 (+) | True | G386265 |
| TU457894 | lncRNA | upstream | 117173 | 13728187 ~ 13737685 (+) | True | G386284 |
| TU457843 | lncRNA | upstream | 196770 | 13655008 ~ 13658088 (+) | True | G386246 |
| TU457741 | lncRNA | upstream | 346853 | 13507398 ~ 13508005 (+) | True | G386147 |
| TU457975 | lncRNA | downstream | 20844 | 13875938 ~ 13876193 (+) | True | G386348 |
| TU457977 | lncRNA | downstream | 35909 | 13891003 ~ 13892625 (+) | True | G386350 |
| XR_004577400.1 | lncRNA | downstream | 46890 | 13901984 ~ 13903993 (+) | True | LOC117596231 |
| TU457998 | lncRNA | downstream | 68726 | 13923820 ~ 13924243 (+) | True | G386359 |
| TU458000 | lncRNA | downstream | 71294 | 13926388 ~ 13926592 (+) | True | G386361 |
| XM_026922443.2 | mRNA | upstream | 44304 | 13806887 ~ 13810554 (+) | True | pex12 |
| XM_026922444.2 | mRNA | upstream | 44304 | 13807507 ~ 13810554 (+) | False | pex12 |
| XM_026922404.2 | mRNA | upstream | 90773 | 13751910 ~ 13764085 (+) | True | LOC113531586 |
| XM_026922405.2 | mRNA | upstream | 103035 | 13744586 ~ 13751823 (+) | True | im:7138535 |
| XM_026921502.2 | mRNA | upstream | 141627 | 13707657 ~ 13713231 (+) | True | napaa |
| XM_034300462.1 | mRNA | downstream | 15557 | 13870651 ~ 13874909 (+) | False | ncf1 |
| XM_034300461.1 | mRNA | downstream | 15557 | 13870651 ~ 13874907 (+) | True | ncf1 |
| XM_026922387.2 | mRNA | downstream | 21741 | 13876835 ~ 13889267 (+) | True | rcc1l |
| XM_026921694.2 | mRNA | downstream | 231548 | 14086642 ~ 14093355 (+) | True | rad51d |
| XM_026921486.2 | mRNA | downstream | 893344 | 14748438 ~ 14756063 (+) | True | nup88 |
| TU457943 | other | upstream | 26710 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 30803 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 2544005 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 3475193 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 4086822 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 1506264 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 2179729 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 2293266 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 2691047 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 2800575 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
