Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU457998 |
| length | 424 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G386359 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13923820 ~ 13924243 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577400.1 | lncRNA | upstream | 19827 | 13901984 ~ 13903993 (+) | True | LOC117596231 |
| TU457977 | lncRNA | upstream | 31195 | 13891003 ~ 13892625 (+) | True | G386350 |
| TU457975 | lncRNA | upstream | 47627 | 13875938 ~ 13876193 (+) | True | G386348 |
| TU457960 | lncRNA | upstream | 68726 | 13854858 ~ 13855094 (+) | True | G386342 |
| TU457948 | lncRNA | upstream | 81174 | 13842343 ~ 13842646 (+) | True | G386330 |
| TU458000 | lncRNA | downstream | 2145 | 13926388 ~ 13926592 (+) | True | G386361 |
| TU458013 | lncRNA | downstream | 19466 | 13943709 ~ 13943939 (+) | True | G386374 |
| TU458014 | lncRNA | downstream | 20025 | 13944268 ~ 13944481 (+) | True | G386375 |
| TU458021 | lncRNA | downstream | 33901 | 13958144 ~ 13958346 (+) | True | G386382 |
| TU458025 | lncRNA | downstream | 37170 | 13961413 ~ 13961709 (+) | True | G386386 |
| XM_026922387.2 | mRNA | upstream | 34553 | 13876835 ~ 13889267 (+) | True | rcc1l |
| XM_034300462.1 | mRNA | upstream | 48911 | 13870651 ~ 13874909 (+) | False | ncf1 |
| XM_034300461.1 | mRNA | upstream | 48913 | 13870651 ~ 13874907 (+) | True | ncf1 |
| XM_026922443.2 | mRNA | upstream | 113266 | 13806887 ~ 13810554 (+) | True | pex12 |
| XM_026921694.2 | mRNA | downstream | 162399 | 14086642 ~ 14093355 (+) | True | rad51d |
| XM_026921486.2 | mRNA | downstream | 824195 | 14748438 ~ 14756063 (+) | True | nup88 |
| XM_026921634.2 | mRNA | downstream | 867890 | 14792133 ~ 14795940 (+) | True | mis12 |
| XM_026921630.2 | mRNA | downstream | 886859 | 14811102 ~ 14855941 (+) | False | mcama |
| XM_026921632.2 | mRNA | downstream | 886861 | 14811104 ~ 14855941 (+) | True | mcama |
| TU457943 | other | upstream | 95672 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 99765 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 2612967 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 3544155 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 4155784 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 1437115 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 2110580 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 2224117 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 2621898 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 2731426 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
