Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU458926 |
| length | 317 |
| lncRNA type | read_through |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G387196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 14834919 ~ 14924865 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458889 | lncRNA | upstream | 118864 | 14708856 ~ 14716055 (+) | True | G387160 |
| XR_004577415.1 | lncRNA | upstream | 650868 | 14152144 ~ 14184051 (+) | False | LOC117596237 |
| TU458144 | lncRNA | upstream | 659494 | 14170058 ~ 14175425 (+) | True | G386495 |
| XR_004577416.1 | lncRNA | upstream | 680777 | 14152144 ~ 14154142 (+) | True | LOC117596237 |
| TU458138 | lncRNA | upstream | 704292 | 14130171 ~ 14130627 (+) | True | G386490 |
| TU458941 | lncRNA | downstream | 9839 | 14934704 ~ 14936042 (+) | True | G387208 |
| TU459148 | lncRNA | downstream | 238519 | 15163384 ~ 15233645 (+) | False | c27h11orf88 |
| TU459154 | lncRNA | downstream | 257448 | 15182313 ~ 15204882 (+) | False | LOC113531625 |
| TU459156 | lncRNA | downstream | 257448 | 15182313 ~ 15204587 (+) | False | LOC113531625 |
| TU459153 | lncRNA | downstream | 278598 | 15203463 ~ 15204587 (+) | True | LOC113531625 |
| XM_026921634.2 | mRNA | upstream | 38979 | 14792133 ~ 14795940 (+) | True | mis12 |
| XM_026921486.2 | mRNA | upstream | 78856 | 14748438 ~ 14756063 (+) | True | nup88 |
| XM_026921694.2 | mRNA | upstream | 741564 | 14086642 ~ 14093355 (+) | True | rad51d |
| XM_026922387.2 | mRNA | upstream | 945652 | 13876835 ~ 13889267 (+) | True | rcc1l |
| XM_034300462.1 | mRNA | upstream | 960010 | 13870651 ~ 13874909 (+) | False | ncf1 |
| XM_026922535.2 | mRNA | downstream | 172203 | 15097068 ~ 15138075 (+) | True | drd2b |
| XM_026921448.2 | mRNA | downstream | 301480 | 15226345 ~ 15233692 (+) | True | c27h11orf88 |
| XM_026921447.2 | mRNA | downstream | 310054 | 15234919 ~ 15242995 (+) | True | layna |
| XM_034300431.1 | mRNA | downstream | 310054 | 15234919 ~ 15242995 (+) | False | layna |
| XM_026922534.2 | mRNA | downstream | 320140 | 15245005 ~ 15261736 (+) | True | sik2a |
| TU457943 | other | upstream | 1006771 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 1010864 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 3524066 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 4455254 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 5066883 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 436493 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 1109958 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 1223495 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 1621276 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 1730804 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
