Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU459154 |
| length | 877 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 2 |
| gene id | LOC113531625 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 15182313 ~ 15204882 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458941 | lncRNA | upstream | 246271 | 14934704 ~ 14936042 (+) | True | G387208 |
| TU458926 | lncRNA | upstream | 257448 | 14834919 ~ 14924865 (+) | True | G387196 |
| TU458927 | lncRNA | upstream | 313612 | 14856268 ~ 14868701 (+) | True | G387197 |
| TU458889 | lncRNA | upstream | 466258 | 14708856 ~ 14716055 (+) | True | G387160 |
| TU458144 | lncRNA | upstream | 1006888 | 14170058 ~ 14175425 (+) | True | G386495 |
| TU459157 | lncRNA | downstream | 872 | 15205754 ~ 15207897 (+) | True | G387383 |
| TU459161 | lncRNA | downstream | 11095 | 15215977 ~ 15218110 (+) | True | G387386 |
| TU459165 | lncRNA | downstream | 56759 | 15261641 ~ 15274079 (+) | False | sik2a |
| TU459163 | lncRNA | downstream | 61225 | 15266107 ~ 15269909 (+) | True | G387388 |
| TU459288 | lncRNA | downstream | 149668 | 15354550 ~ 15361017 (+) | False | zgc:193711 |
| XM_026922535.2 | mRNA | upstream | 44238 | 15097068 ~ 15138075 (+) | True | drd2b |
| XM_034300511.1 | mRNA | upstream | 265815 | 14862358 ~ 14916498 (+) | True | arhgef12b |
| XM_026921636.2 | mRNA | upstream | 321569 | 14858557 ~ 14860744 (+) | True | tlcd5b |
| XM_034300876.1 | mRNA | upstream | 321569 | 14858557 ~ 14860744 (+) | False | tlcd5b |
| XM_026921633.2 | mRNA | upstream | 326372 | 14811472 ~ 14855941 (+) | False | mcama |
| XM_026921448.2 | mRNA | downstream | 21463 | 15226345 ~ 15233692 (+) | True | c27h11orf88 |
| XM_026921447.2 | mRNA | downstream | 30037 | 15234919 ~ 15242995 (+) | True | layna |
| XM_034300431.1 | mRNA | downstream | 30037 | 15234919 ~ 15242995 (+) | False | layna |
| XM_026922534.2 | mRNA | downstream | 40123 | 15245005 ~ 15261736 (+) | True | sik2a |
| XM_034300939.1 | mRNA | downstream | 42500 | 15247382 ~ 15261736 (+) | False | sik2a |
| TU457943 | other | upstream | 1354165 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 1358258 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 3871460 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 4802648 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 5414277 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 156476 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 829941 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 943478 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 1341259 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 1450787 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
