Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU459161 |
| length | 1221 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 4 |
| gene id | G387386 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 15215977 ~ 15218110 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU459157 | lncRNA | upstream | 8080 | 15205754 ~ 15207897 (+) | True | G387383 |
| TU459154 | lncRNA | upstream | 11095 | 15182313 ~ 15204882 (+) | False | LOC113531625 |
| TU459156 | lncRNA | upstream | 11390 | 15182313 ~ 15204587 (+) | False | LOC113531625 |
| TU459153 | lncRNA | upstream | 11390 | 15203463 ~ 15204587 (+) | True | LOC113531625 |
| XR_003403270.2 | lncRNA | upstream | 11709 | 15203501 ~ 15204268 (+) | False | LOC113531625 |
| TU459165 | lncRNA | downstream | 43531 | 15261641 ~ 15274079 (+) | False | sik2a |
| TU459163 | lncRNA | downstream | 47997 | 15266107 ~ 15269909 (+) | True | G387388 |
| TU459288 | lncRNA | downstream | 136440 | 15354550 ~ 15361017 (+) | False | zgc:193711 |
| TU459304 | lncRNA | downstream | 152452 | 15370562 ~ 15370773 (+) | True | G387504 |
| TU459313 | lncRNA | downstream | 172509 | 15390619 ~ 15390835 (+) | True | G387513 |
| XM_026922535.2 | mRNA | upstream | 77902 | 15097068 ~ 15138075 (+) | True | drd2b |
| XM_034300511.1 | mRNA | upstream | 299479 | 14862358 ~ 14916498 (+) | True | arhgef12b |
| XM_026921636.2 | mRNA | upstream | 355233 | 14858557 ~ 14860744 (+) | True | tlcd5b |
| XM_034300876.1 | mRNA | upstream | 355233 | 14858557 ~ 14860744 (+) | False | tlcd5b |
| XM_026921633.2 | mRNA | upstream | 360036 | 14811472 ~ 14855941 (+) | False | mcama |
| XM_026921448.2 | mRNA | downstream | 8235 | 15226345 ~ 15233692 (+) | True | c27h11orf88 |
| XM_026921447.2 | mRNA | downstream | 16809 | 15234919 ~ 15242995 (+) | True | layna |
| XM_034300431.1 | mRNA | downstream | 16809 | 15234919 ~ 15242995 (+) | False | layna |
| XM_026922534.2 | mRNA | downstream | 26895 | 15245005 ~ 15261736 (+) | True | sik2a |
| XM_034300939.1 | mRNA | downstream | 29272 | 15247382 ~ 15261736 (+) | False | sik2a |
| TU457943 | other | upstream | 1387829 | 13825850 ~ 13828148 (+) | True | G386325 |
| TU457909 | other | upstream | 1391922 | 13821788 ~ 13824055 (+) | True | G386294 |
| XR_003403209.2 | other | upstream | 3905124 | 11297980 ~ 11310853 (+) | False | ajm1 |
| TU455978 | other | upstream | 4836312 | 10378213 ~ 10379665 (+) | True | G384593 |
| TU455483 | other | upstream | 5447941 | 9765740 ~ 9768036 (+) | True | G384178 |
| XR_004577401.1 | other | downstream | 143248 | 15361358 ~ 15367247 (+) | True | fkbp6 |
| TU459555 | other | downstream | 816713 | 16034823 ~ 16038605 (+) | True | LOC113531248 |
| trnam-cau_49 | other | downstream | 930250 | 16148360 ~ 16148432 (+) | True | trnam-cau_49 |
| TU460079 | other | downstream | 1328031 | 16546141 ~ 16555532 (+) | False | cdc42ep2 |
| TU460111 | other | downstream | 1437559 | 16655669 ~ 16657113 (+) | True | LOC113531241 |
